Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43370 | Canola | cytosol | 100.0 | 100.0 |
| CDY40782 | Canola | cytosol | 100.0 | 100.0 |
| CDX92625 | Canola | cytosol | 100.0 | 100.0 |
| CDY27109 | Canola | cytosol | 100.0 | 100.0 |
| CDX77335 | Canola | cytosol | 100.0 | 26.78 |
| CDY41854 | Canola | cytosol | 17.7 | 3.68 |
| CDY12836 | Canola | extracellular, vacuole | 1.77 | 2.35 |
| CDX87098 | Canola | nucleus | 9.73 | 1.65 |
| CDY05378 | Canola | nucleus | 8.85 | 1.51 |
| CDY05473 | Canola | nucleus | 8.85 | 1.5 |
| CDY19814 | Canola | nucleus | 8.85 | 1.5 |
| CDY12834 | Canola | endoplasmic reticulum, extracellular | 1.77 | 1.08 |
| CDX69423 | Canola | cytosol, mitochondrion, nucleus, plastid | 5.31 | 0.69 |
| CDY14200 | Canola | cytosol | 1.77 | 0.62 |
| CDY43529 | Canola | cytosol | 1.77 | 0.62 |
| CDX68590 | Canola | cytosol | 1.77 | 0.62 |
| CDY03567 | Canola | cytosol | 1.77 | 0.62 |
| CDY38089 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.42 | 0.58 |
| CDX85488 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.42 | 0.57 |
| CDY16982 | Canola | cytosol, mitochondrion, nucleus, plastid | 4.42 | 0.57 |
| CDY22910 | Canola | nucleus | 4.42 | 0.54 |
| CDY54973 | Canola | nucleus | 4.42 | 0.54 |
| CDX79933 | Canola | nucleus | 1.77 | 0.47 |
| CDY23845 | Canola | nucleus | 1.77 | 0.47 |
| CDY57442 | Canola | cytosol | 0.88 | 0.45 |
| CDY06918 | Canola | cytosol, nucleus, peroxisome | 1.77 | 0.41 |
| CDY14776 | Canola | mitochondrion | 1.77 | 0.36 |
| CDY18648 | Canola | cytosol | 1.77 | 0.35 |
| CDY57444 | Canola | cytosol, mitochondrion | 0.88 | 0.34 |
| CDX81324 | Canola | cytosol | 1.77 | 0.33 |
| CDY11502 | Canola | cytosol | 0.0 | 0.0 |
| CDX76728 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY72066 | EnsemblPlantsGene:GSBRNA2T00023520001 | ProteinID:CDY27109.1 | ProteinID:CDY40782.1 | ProteinID:CDY43370.1 | ProteinID:CDY72066 |
| ProteinID:CDY72066.1 | UniParc:UPI0004EECBCF | UniProt:A0A078DTG0 | MapMan:35.2 | : | : |
Description
BnaAnng39760DBnaA01g30010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DTG0]
Coordinates
chrLK048785:+:892..1324
Molecular Weight (calculated)
13442.3 Da
IEP (calculated)
9.435
GRAVY (calculated)
0.094
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVKEIYVVR GGHEVWASER MYSSCLFSES NSNRSITKPE VSVASCKIKN TELIKRAFFQ NVFEYEPAIN FLFFDKIQNY INFICYIAWP TKAFRIFLKK
101: YLHTFWLNTI AVI
101: YLHTFWLNTI AVI
001: MDSRGDSSRF GQYPTKPTRN MSSSSSAAFF SANQSPFFSP RSPKIQQELS ESTRSDAQCD SFDPLSSSSG FQEPELAFLT APNQCQSLEA ADRIASSSMI
101: SCTPSRYGRG HESSSYTQTS SVSVSYNRLR CCDVFIGLYG QKPSLLRFAD WLRAELEFQG MSCFMSDRGR CRSSRKQRIV ERAMDGASFG VIILTRKAFK
201: NPYTIEELRF FANKKNLVPV FFDLSPGECL VRDIVEKRGD LWEKHGGELW VLYGGIEKEW KEAVHGLSRV DDWKLEAHEG NWRDCVFRAV TLLAMRLGRR
301: SIVERLTKWR DKAEKEEFPY PRNESFVGRK KELSELEFVL FGDVAGDSER DYFELKARPT RRKKNVTLGW NKSGSAEERR KKGKEKVVWK ESEKEIEMQS
401: TEMPSRSQVK VGRNTRRKRS MKVVYGKGVA CVSGESGIGK TELLLEFAYR HHQRYKMVLW IGGESRYIRQ NYLNLYQYLE VDIGIENSSD KTRMKSFEEQ
501: EDAAVSKIRK ELMRNIPFLV VIDNLESEKD WWDSKLVMDL LPRFGGGTHI LISTRLSQVM NMEPLKLSYL SGAEAMSLMQ GNVKDYPVSE MDALRTIEDK
601: LGRLTLGLAV VGAILSELPI NPSRLLDTIN RMPLREMVCS GREGNLLRRN AFLLQLFEVC FSIFDHADGP RSLATRMVVA SGWLAPAPVP ASLLALAAHK
701: LPEKHRGPKR LWRRLRRAIT CGFTSSNSKR SGAEAASMLL RFNIARTSSI KLGFIQIHEL VKLYARNRVL VNENAPAMVQ AVISRGSTVE TAEQIWAVCF
801: LLFGFSNESP TIQLKITELL ILVKQVILPL AIRTFISFSR CTASVELLRV CTNALEAADQ TLVTPVEKWL DKSLCWRPVQ TSAQLNPILW EELALARATV
901: LETRAKLMLR GGQFGLADDL IRKAIFIRTS ISGEDHPGTV SARETLSKLT RLLSNVHQIH NTSP
101: SCTPSRYGRG HESSSYTQTS SVSVSYNRLR CCDVFIGLYG QKPSLLRFAD WLRAELEFQG MSCFMSDRGR CRSSRKQRIV ERAMDGASFG VIILTRKAFK
201: NPYTIEELRF FANKKNLVPV FFDLSPGECL VRDIVEKRGD LWEKHGGELW VLYGGIEKEW KEAVHGLSRV DDWKLEAHEG NWRDCVFRAV TLLAMRLGRR
301: SIVERLTKWR DKAEKEEFPY PRNESFVGRK KELSELEFVL FGDVAGDSER DYFELKARPT RRKKNVTLGW NKSGSAEERR KKGKEKVVWK ESEKEIEMQS
401: TEMPSRSQVK VGRNTRRKRS MKVVYGKGVA CVSGESGIGK TELLLEFAYR HHQRYKMVLW IGGESRYIRQ NYLNLYQYLE VDIGIENSSD KTRMKSFEEQ
501: EDAAVSKIRK ELMRNIPFLV VIDNLESEKD WWDSKLVMDL LPRFGGGTHI LISTRLSQVM NMEPLKLSYL SGAEAMSLMQ GNVKDYPVSE MDALRTIEDK
601: LGRLTLGLAV VGAILSELPI NPSRLLDTIN RMPLREMVCS GREGNLLRRN AFLLQLFEVC FSIFDHADGP RSLATRMVVA SGWLAPAPVP ASLLALAAHK
701: LPEKHRGPKR LWRRLRRAIT CGFTSSNSKR SGAEAASMLL RFNIARTSSI KLGFIQIHEL VKLYARNRVL VNENAPAMVQ AVISRGSTVE TAEQIWAVCF
801: LLFGFSNESP TIQLKITELL ILVKQVILPL AIRTFISFSR CTASVELLRV CTNALEAADQ TLVTPVEKWL DKSLCWRPVQ TSAQLNPILW EELALARATV
901: LETRAKLMLR GGQFGLADDL IRKAIFIRTS ISGEDHPGTV SARETLSKLT RLLSNVHQIH NTSP
Arabidopsis Description
Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:O81740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.