CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04500	Soybean	cytosol	75.0	58.93
KRH04498	Soybean	mitochondrion	63.18	53.26
GSMUA_Achr6P34790_001	Banana	extracellular	36.82	51.92
CDY18648	Canola	cytosol	88.64	34.09
CDX81324	Canola	cytosol	88.64	31.76
AT5G67320.1	Thale cress	cytosol	85.0	30.51
KRH28415	Soybean	nucleus	75.45	29.75
VIT_07s0129g00690.t01	Wine grape	nucleus	77.73	28.64
TraesCS2D01G235100.1	Wheat	nucleus	67.73	26.8
KRH58014	Soybean	nucleus	75.91	26.76
TraesCS2B01G255700.1	Wheat	nucleus	67.73	26.7
TraesCS2A01G227200.3	Wheat	cytosol	67.73	26.65
Zm00001d025048_P003	Maize	cytosol	67.73	26.56
Os07t0405100-01	Rice	cytosol	66.82	26.49
HORVU2Hr1G053480.9	Barley	mitochondrion	67.27	26.43
EES11818	Sorghum	nucleus, plastid	67.27	24.58
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	65.45	24.08
GSMUA_Achr6P34780_001	Banana	cytosol	37.73	17.7
CDY11502	Canola	cytosol	20.45	13.01
CDX76728	Canola	cytosol	20.0	12.72
CDX68590	Canola	cytosol	16.36	11.21
CDY03567	Canola	cytosol	16.36	11.21
CDY14200	Canola	cytosol	16.36	11.21
CDY43529	Canola	cytosol	15.91	10.9
CDX79933	Canola	nucleus	16.82	8.62
CDY23845	Canola	nucleus	16.82	8.6
CDY41854	Canola	cytosol	18.64	7.54
CDY06918	Canola	cytosol, nucleus, peroxisome	16.36	7.42
CDY19814	Canola	nucleus	20.0	6.59
CDX87098	Canola	nucleus	20.0	6.59
CDY14776	Canola	mitochondrion	16.36	6.52
CDY05378	Canola	nucleus	19.55	6.48
CDY05473	Canola	nucleus	19.55	6.46
CDY22910	Canola	nucleus	19.55	4.62
CDY54973	Canola	nucleus	19.55	4.62
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	15.45	3.92
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	15.45	3.9
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	15.0	3.8
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	15.0	3.76
CDY12836	Canola	extracellular, vacuole	1.36	3.53
CDX77335	Canola	cytosol	6.36	3.32
KRH04503	Soybean	nucleus	1.82	1.2
CDY12834	Canola	endoplasmic reticulum, extracellular	0.91	1.08
CDY57444	Canola	cytosol, mitochondrion	1.36	1.03
CDY72066	Canola	cytosol	0.45	0.88
CDY43370	Canola	cytosol	0.45	0.88
CDY40782	Canola	cytosol	0.45	0.88
CDX92625	Canola	cytosol	0.45	0.88
CDY27109	Canola	cytosol	0.45	0.88

Protein Annotations

MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A078IYU1	EnsemblPlants:CDY57442	ProteinID:CDY57442	ProteinID:CDY57442.1
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00022221001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EE3E86
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

BnaAnng14560DBnaAnng14560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYU1]

Coordinates

chrLK033575:-:43318..44485

Molecular Weight (calculated)

24359.6 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.364

Length

220 amino acids

Sequence
(BLAST)

001: MHEYEYDTGC NCNIGPTLDV DWRNNVSFAT SSTDTMIYLS KIGETRPVKT FAGHQGEVNC VKWDPTGTLL ASCSDDSTAK MWNVKQHSFV HDLRDHSKEI
101: YTIRWSPTGP GTNNPNKPLT LASASFDSTV KIWDAELGKM LCNLNGHRDA VYSLAFSPNG EYIVSGSVDK SIHIWSLKEG KIVKTYTGAG GIFEVCWNKE
201: GNKLAACFAD NSVSVLDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.