Factsheet for HORVU2Hr1G053480.9

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G235100.1	Wheat	nucleus	94.11	94.78
TraesCS2B01G255700.1	Wheat	nucleus	94.11	94.44
TraesCS2A01G227200.3	Wheat	cytosol	93.75	93.92
Os07t0405100-01	Rice	cytosol	85.89	86.67
Zm00001d025048_P003	Maize	cytosol	84.64	84.49
EES11818	Sorghum	nucleus, plastid	85.18	79.24
KRH04500	Soybean	cytosol	39.11	78.21
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	81.61	76.42
CDY57442	Canola	cytosol	26.43	67.27
PGSC0003DMT400093628	Potato	cytosol, mitochondrion	42.32	67.14
GSMUA_Achr6P34780_001	Banana	cytosol	55.71	66.52
PGSC0003DMT400039889	Potato	cytosol	6.79	65.52
KRH04498	Soybean	mitochondrion	30.36	65.13
Solyc04g078320.2.1	Tomato	cytosol	66.79	63.18
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.11	62.99
VIT_07s0129g00690.t01	Wine grape	nucleus	66.79	62.65
Solyc12g049100.1.1	Tomato	cytosol	39.46	62.61
KRH28415	Soybean	nucleus	62.32	62.54
Solyc05g014420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.89	61.89
KRH61363	Soybean	nucleus	61.96	61.09
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.75	60.32
PGSC0003DMT400093026	Potato	cytosol	54.11	59.3
Solyc12g088620.1.1	Tomato	cytosol	54.46	58.43
Solyc05g014460.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.57	58.23
Solyc12g088630.1.1	Tomato	cytosol	52.86	57.93
KRH58014	Soybean	nucleus	63.75	57.21
CDY18648	Canola	cytosol	58.39	57.17
Solyc12g088570.1.1	Tomato	cytosol	36.43	56.04
AT5G67320.1	Thale cress	cytosol	60.71	55.46
KRH52050	Soybean	cytosol, nucleus, peroxisome	63.21	55.4
Bra037118.1-P	Field mustard	cytosol	59.82	54.74
CDX81324	Canola	cytosol	60.0	54.72
KRH04503	Soybean	nucleus	25.18	42.22
VIT_18s0001g09600.t01	Wine grape	cytosol	36.96	37.84
CDY57444	Canola	cytosol, mitochondrion	17.68	34.14
HORVU7Hr1G101230.1	Barley	cytosol	13.75	22.78
HORVU4Hr1G033170.1	Barley	cytosol	12.5	20.47
HORVU2Hr1G032990.1	Barley	cytosol	13.57	19.54
HORVU4Hr1G034750.1	Barley	cytosol, nucleus, plastid	15.89	17.66
HORVU0Hr1G022460.1	Barley	nucleus	14.64	16.77
HORVU7Hr1G113760.2	Barley	nucleus	17.32	14.79
HORVU2Hr1G106110.11	Barley	mitochondrion	15.18	9.65
HORVU4Hr1G083410.1	Barley	endoplasmic reticulum	15.54	8.59

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A287I134	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009628	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G053480
EnsemblPlants:HORVU2Hr1G053480.9	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI000B47D277	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:327885326..327908188

Molecular Weight (calculated)

63103.3 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.581

Length

560 amino acids

Sequence
(BLAST)

001: MHMIVVWCIY TQRAKAHHLL AHWSFVHSAF TLGYEAGIHK GGIDGNVVPP GALITVVQKG LQYIELEANT DENDQEVGKD FALLEPLEII TKDVEELQQI
101: VKKRKRERLQ IVCDKDKGKA KECIEEHEHR LGGERERERH DKEKDQEMEK DRTERDKVQE KEKEREKQNT EYIDKVIKHE EDPLASGGPK PMDVSTTPHE
201: IFSVDVTVLE GHSSEVFACA WSPAGSLLAS GSGDSTARIW TIPDGPCGSI QPSPASVHVL KHFKGRTNEK SKDVTTLDWN GEGTLLATGS YDGQARIWSR
301: DGELKQTLFK HKGPIFSLKW NRKGDFLLSG SVDKTAIVWD TKTWECKQQF EFHSAPTLDV DWRNNNSFAT CSTDNMIYVC KIGDPRPVKT FSGHQSEVNA
401: IKWDPTGSLL ASCSDDWTAK IWSVKQDKCV YDFKEHTKEI YTIRWSPTGP GTNNPNQQLL LASASFDSSI KLWEVEQGHL LYSLAGHRQP VYSVAFSPDG
501: EYLASGSLDQ SLHIWSVKEG RILKTFRGSG GIFEVCWNKE GSKIAACFSN NTVCVMDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.