Factsheet for Solyc05g014420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039889	Potato	cytosol	13.51	86.21
Solyc05g014460.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.57	68.5
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.73	66.53
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.51	64.24
Solyc12g088570.1.1	Tomato	cytosol	61.08	62.09
Solyc12g049100.1.1	Tomato	cytosol	56.76	59.49
Solyc12g088620.1.1	Tomato	cytosol	82.7	58.62
Solyc12g088630.1.1	Tomato	cytosol	69.73	50.49
GSMUA_Achr6P34790_001	Banana	extracellular	20.81	49.36
Solyc04g078320.2.1	Tomato	cytosol	71.08	44.43
Zm00001d025048_P003	Maize	cytosol	66.76	44.03
Os07t0405100-01	Rice	cytosol	65.68	43.78
TraesCS2D01G235100.1	Wheat	nucleus	64.86	43.17
TraesCS2B01G255700.1	Wheat	nucleus	64.86	43.01
TraesCS2A01G227200.3	Wheat	cytosol	64.86	42.93
KRH61363	Soybean	nucleus	65.41	42.61
EES11818	Sorghum	nucleus, plastid	66.76	41.03
HORVU2Hr1G053480.9	Barley	mitochondrion	61.89	40.89
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	65.14	40.3
KRH52050	Soybean	cytosol, nucleus, peroxisome	64.86	37.56
GSMUA_Achr6P34780_001	Banana	cytosol	46.76	36.89
Solyc09g074400.2.1	Tomato	cytosol	18.65	19.66
Solyc12g009030.1.1	Tomato	cytosol, nucleus	14.86	17.03
Solyc07g041080.2.1	Tomato	cytosol, nucleus	14.86	17.03
Solyc09g009410.2.1	Tomato	cytosol, nucleus	14.86	15.8
Solyc04g016510.2.1	Tomato	nucleus	18.92	14.34
Solyc06g065700.2.1	Tomato	nucleus	21.08	11.39
Solyc03g097160.2.1	Tomato	nucleus	16.76	7.12
Solyc10g039190.1.1	Tomato	nucleus	17.57	6.84

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000118	GO:GO:0003674
GO:GO:0003714	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006357	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575	GO:GO:0019538
GO:GO:1903507	InterPro:IPR001680	InterPro:IPR007110	InterPro:IPR015943	InterPro:IPR017986	InterPro:Ig-like_dom
UniProt:K4BYG1	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PFscan:PS50835	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:Solyc05g014420.1
EnsemblPlants:Solyc05g014420.1.1	UniParc:UPI00027664C9	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:+:8280368..8283819

Molecular Weight (calculated)

41271.6 Da

IEP (calculated)

5.932

GRAVY (calculated)

-0.342

Length

370 amino acids

Sequence
(BLAST)

001: MASLTSEFLN FIVFCYLFES GFTHATFTFE YEMHDNTDMN EDFKLLEPMD LITKSVDELR KIIKEKQHKE KEREHDSERS DVMVLEGHIS EVFACAWSPE
101: GSLLASGEGT LLATGSYDGQ ARIWKQSVRG ELVCTLNKHK GPIMSLKWNK KGNYLLSGSI DTTAVVWNVK SGESKQQFGF HSGQLLDVAG QNNDSFATSS
201: ADRMIYDCKV GENKTVKKFS GHQNEINAIN WDPSGSLLAS CSDDTTVKEI YTIKWSPTGA GTSNPNQQLL VASASFVTTV KLWDVHHGCL LHSFNGHREP
301: VYSIAFSPDG EYLASGSVDK CMNIWSVKEA KLVRTYDGDG GIFEVCWNKE GNKVATCFAN KKVCVFDLRL

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.