CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61363	Soybean	nucleus	84.51	95.07
KRH04500	Soybean	cytosol	35.21	80.36
KRH04498	Soybean	mitochondrion	27.86	68.2
PGSC0003DMT400039889	Potato	cytosol	6.1	67.24
KRH28415	Soybean	nucleus	58.22	66.67
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.92	66.32
Solyc04g078320.2.1	Tomato	cytosol	60.72	65.54
TraesCS2B01G255700.1	Wheat	nucleus	57.12	65.41
Os07t0405100-01	Rice	cytosol	56.81	65.41
TraesCS2D01G235100.1	Wheat	nucleus	56.81	65.29
Zm00001d025048_P003	Maize	cytosol	57.28	65.24
TraesCS2A01G227200.3	Wheat	cytosol	56.81	64.94
Solyc05g014420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.56	64.86
PGSC0003DMT400093628	Potato	cytosol, mitochondrion	35.68	64.59
GSMUA_Achr6P34780_001	Banana	cytosol	46.79	63.75
HORVU2Hr1G053480.9	Barley	mitochondrion	55.4	63.21
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.14	62.93
PGSC0003DMT400093026	Potato	cytosol	50.23	62.82
EES11818	Sorghum	nucleus, plastid	57.9	61.46
Solyc05g014460.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.22	61.34
Solyc12g088620.1.1	Tomato	cytosol	49.77	60.92
Solyc12g088630.1.1	Tomato	cytosol	48.51	60.67
Solyc12g049100.1.1	Tomato	cytosol	33.33	60.34
KRH58014	Soybean	nucleus	58.84	60.26
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	56.18	60.03
GSMUA_Achr6P34790_001	Banana	extracellular	14.24	58.33
Solyc12g088570.1.1	Tomato	cytosol	32.71	57.42
KRH04503	Soybean	nucleus	23.94	45.81
KRG99418	Soybean	cytosol, extracellular, plastid	3.6	26.44
KRH67917	Soybean	cytosol	13.77	25.66
KRH15679	Soybean	cytosol	4.54	22.83
KRH33352	Soybean	plastid	9.08	22.83
KRH02663	Soybean	cytosol, nucleus	9.7	19.31
KRH19247	Soybean	cytosol, endoplasmic reticulum	9.7	19.31
KRH72083	Soybean	nucleus	15.02	16.84
KRH31616	Soybean	nucleus	15.02	16.84
KRH61671	Soybean	nucleus	15.02	14.35
KRH52333	Soybean	nucleus	14.71	14.18
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	9.86	14.06
KRH05348	Soybean	nucleus	14.24	13.83
KRG94333	Soybean	cytosol	3.91	12.38
KRH03286	Soybean	nucleus	13.3	9.67
KRH57076	Soybean	plasma membrane	12.36	9.34
KRH67774	Soybean	nucleus, plastid	13.77	9.33
KRG96051	Soybean	nucleus	13.77	9.32

Protein Annotations

Gene3D:1.20.960.30	EntrezGene:100792917	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A0R0JFR6	EMBL:ACUP02003404
ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_06G043800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRH52050	ProteinID:KRH52050	ProteinID:KRH52050.1	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SUPFAM:SSF50978
TMHMM:TMhelix	UniParc:UPI00054A4300	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:3334273..3340830

Molecular Weight (calculated)

72337.0 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.495

Length

639 amino acids

Sequence
(BLAST)

001: MISITSTELN YLVFRYLHES GSSFPYSFSF LAHYITILHY MLININIYFG YYAATLPFSS QLHHSIPKFF IFTICQRVSL FRPYYDGFYK VRRFGFTHSA
101: FAFGYEAGID KSKNDDSVVP PGALVTFIQK GIQYLELEAN LSGSDADMDE DFSFLQPLDL ITKGPSELHN IVKARKENLR QHKFESNKII NDLSQDDPRR
201: EETEKERKEK ENEHTLEKIR LEKDKEPPKP EYKEIQHTDQ NHTEKPEDKI TVENLENRAQ GGAEPMEISQ SPMSSPDDTP CGYVKLLKGH TSEVFACAWN
301: PSAPLLASGS GDSTARIWKI ADGACDSSVQ NEPVNVVVLQ HFKESTNEKS KDVTTLDWNG DGTLLATGSY DGQARIWSRD GELNCTLNKH RGPIFSLKWN
401: KKGDYLLSGS VDKTAIVWNI KTVEWKQLFE FHTGPTLDVD WRNNVSFATC STDKMIHVCK IGENRPIKTF SGHQDEVNAI KWDPSGSLLA SCSDDHTAKI
501: WSLKQDNFLH DLKEHVKGIY TIRWSPTGPG TNSPNQQLVL ASASFDSTIK LWDVELGNVL YSLNGHRDPV YSVAFSPNGE YLASGSMDRY LHIWSVKEGK
601: IVKTYTGKGG IFEVNWNKDG DKVAACFSNN IVCVLDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.