CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	52.97	23.88
KRH03286	Soybean	nucleus	94.55	21.73
KRH57076	Soybean	plasma membrane	89.6	21.39
KRH04500	Soybean	cytosol	13.86	10.0
KRH02663	Soybean	cytosol, nucleus	14.85	9.35
KRH67917	Soybean	cytosol	15.84	9.33
KRH19247	Soybean	cytosol, endoplasmic reticulum	14.36	9.03
KRH04498	Soybean	mitochondrion	9.9	7.66
KRG99418	Soybean	cytosol, extracellular, plastid	2.97	6.9
KRH33352	Soybean	plastid	7.43	5.91
KRH05348	Soybean	nucleus	18.32	5.62
KRH15679	Soybean	cytosol	3.47	5.51
KRH52333	Soybean	nucleus	17.33	5.28
KRH61671	Soybean	nucleus	17.33	5.23
KRH28415	Soybean	nucleus	13.86	5.02
KRH67774	Soybean	nucleus, plastid	21.78	4.67
KRG96051	Soybean	nucleus	21.78	4.66
KRH72083	Soybean	nucleus	12.87	4.56
KRH31616	Soybean	nucleus	12.87	4.56
KRH58014	Soybean	nucleus	13.86	4.49
Bra010317.1-P	Field mustard	cytosol	4.95	4.48
KRH61363	Soybean	nucleus	12.38	4.4
KRH52050	Soybean	cytosol, nucleus, peroxisome	12.38	3.91
OQU76815	Sorghum	plastid	0.99	0.95
OQU84751	Sorghum	plastid	0.0	0.0
KRH04503	Soybean	nucleus	0.0	0.0
CDX92625	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	UniProt:A0A0R0EJ70	EMBL:ACUP02011935	EnsemblPlantsGene:GLYMA_19G076900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0032040	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRG94333	ProteinID:KRG94333	ProteinID:KRG94333.1	PFAM:PF00400	PFAM:PF08625	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15	SMART:SM00320	SUPFAM:SSF50978	InterPro:SSU_processome_Utp13
UniParc:UPI0006ED5D3C	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:27697157..27698454

Molecular Weight (calculated)

22312.9 Da

IEP (calculated)

7.427

GRAVY (calculated)

-0.041

Length

202 amino acids

Sequence
(BLAST)

001: MDGLSDNMTM PINLKAKAVV AAHDKDINSV AVAPNDSLVC SGSQDRTTCV WRLPDLVSVV VFKGHKRGIW SVEFSPVDQC VVTASGDKTI RIWAISDGSC
101: LKTFEGHTSS VLRALFVTRG TQIVSCGMRL SEEGVVKGQE LENAVSDADY TKAIQIAFEL RRPHRLFELF AELCRKRVAE NHMDRALKGL GGEELRILFN
201: YI

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.