CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04498	Soybean	mitochondrion	71.07	76.25
CDY57442	Canola	cytosol	58.93	75.0
GSMUA_Achr6P34790_001	Banana	extracellular	29.64	53.21
KRH28415	Soybean	nucleus	89.29	44.8
KRH58014	Soybean	nucleus	98.21	44.07
VIT_07s0129g00690.t01	Wine grape	nucleus	90.0	42.21
CDY18648	Canola	cytosol	82.86	40.56
Os07t0405100-01	Rice	cytosol	78.57	39.64
Zm00001d025048_P003	Maize	cytosol	78.93	39.39
TraesCS2D01G235100.1	Wheat	nucleus	78.21	39.39
TraesCS2B01G255700.1	Wheat	nucleus	78.21	39.25
TraesCS2A01G227200.3	Wheat	cytosol	78.21	39.18
AT5G67320.1	Thale cress	cytosol	85.71	39.15
HORVU2Hr1G053480.9	Barley	mitochondrion	78.21	39.11
KRH61363	Soybean	nucleus	79.29	39.08
Bra037118.1-P	Field mustard	cytosol	82.86	37.91
CDX81324	Canola	cytosol	82.5	37.62
EES11818	Sorghum	nucleus, plastid	79.29	36.88
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	78.21	36.62
KRH52050	Soybean	cytosol, nucleus, peroxisome	80.36	35.21
GSMUA_Achr6P34780_001	Banana	cytosol	50.71	30.28
KRG99418	Soybean	cytosol, extracellular, plastid	6.79	21.84
KRH15679	Soybean	cytosol	9.29	20.47
KRH67917	Soybean	cytosol	21.79	17.78
KRH02663	Soybean	cytosol, nucleus	17.86	15.58
KRH19247	Soybean	cytosol, endoplasmic reticulum	17.5	15.26
KRH33352	Soybean	plastid	12.86	14.17
KRG94333	Soybean	cytosol	10.0	13.86
KRH31616	Soybean	nucleus	23.93	11.75
KRH72083	Soybean	nucleus	23.93	11.75
KRH05348	Soybean	nucleus	21.07	8.97
KRH52333	Soybean	nucleus	20.71	8.75
KRH61671	Soybean	nucleus	20.71	8.67
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	13.21	8.26
KRH67774	Soybean	nucleus, plastid	18.93	5.62
KRG96051	Soybean	nucleus	18.93	5.61
KRH03286	Soybean	nucleus	17.5	5.57
KRH57076	Soybean	plasma membrane	16.07	5.32
CDY57444	Canola	cytosol, mitochondrion	0.36	0.34
KRH04503	Soybean	nucleus	0.0	0.0

Protein Annotations

MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A0R0FPG7	EMBL:ACUP02010431	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_17G1659002
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRH04500	ProteinID:KRH04500	ProteinID:KRH04500.1	ProteinID:KRH04501.1	ProteinID:KRH04502.1	PFAM:PF00400
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EDB497	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:15124051..15129456

Molecular Weight (calculated)

31319.9 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.415

Length

280 amino acids

Sequence
(BLAST)

001: GEGTLLATGS YDGQARIWTT NGELKSTLSK HKGPIFSLKW NKKGDYLLTG SCDQTAIVWD VKAEEWKQQF EFHSGPTLDV DWRNNVSFAT SSTDNMIYVC
101: KIGETRPIKT FAGHQGEVNC VKWDPSGSLL ASCSDDITAK IWSMKQDTYL HDLREHSKEI YTIRWSPTGP GTNNPNHKLV LASASFDSTV KLWDVELGKL
201: MYSLDGHRHP VYSVAFSPNG DYLVSGSLDR SMHIWSLRDG KIVKTYTGNG GIFEVCWNKE GDKIAACFAN NTVCVLDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.