Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72083 | Soybean | nucleus | 97.02 | 97.02 |
| Solyc04g016510.2.1 | Tomato | nucleus | 66.84 | 78.07 |
| PGSC0003DMT400033081 | Potato | cytosol, nucleus, plastid | 74.74 | 73.07 |
| GSMUA_Achr11P... | Banana | nucleus | 55.61 | 72.54 |
| Bra004625.1-P | Field mustard | nucleus | 58.77 | 68.51 |
| Bra016929.1-P | Field mustard | nucleus, plastid | 63.86 | 66.79 |
| CDX79933 | Canola | nucleus | 50.0 | 66.43 |
| VIT_08s0007g05930.t01 | Wine grape | nucleus | 76.67 | 66.31 |
| CDY23845 | Canola | nucleus | 50.0 | 66.28 |
| EER94850 | Sorghum | plastid | 59.47 | 65.19 |
| AT2G41500.1 | Thale cress | nucleus, plastid | 63.16 | 64.98 |
| CDY06918 | Canola | cytosol, nucleus, peroxisome | 54.74 | 64.33 |
| TraesCS4A01G149100.1 | Wheat | cytosol, nucleus, plastid | 56.67 | 63.46 |
| TraesCS4D01G160600.1 | Wheat | cytosol, nucleus | 56.67 | 63.46 |
| TraesCS4B01G163800.1 | Wheat | cytosol, nucleus, plastid | 56.49 | 63.26 |
| HORVU4Hr1G034750.1 | Barley | cytosol, nucleus, plastid | 55.79 | 63.1 |
| Os03t0355400-00 | Rice | cytosol, nucleus, plastid | 57.89 | 62.98 |
| Os03t0355200-00 | Rice | cytosol, nucleus, plastid | 57.89 | 62.98 |
| TraesCS2B01G201600.1 | Wheat | cytosol, nucleus, plastid | 56.32 | 62.57 |
| Zm00001d029188_P006 | Maize | cytosol, nucleus, plastid, vacuole | 58.77 | 60.8 |
| TraesCS2D01G182600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.67 | 59.59 |
| AT2G05720.1 | Thale cress | cytosol | 28.6 | 59.06 |
| TraesCS2A01G175200.1 | Wheat | plastid | 55.79 | 57.5 |
| CDY14776 | Canola | mitochondrion | 55.44 | 57.25 |
| HORVU2Hr1G032990.1 | Barley | cytosol | 35.44 | 51.93 |
| OQU81634 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 15.79 | 50.0 |
| OQU89577 | Sorghum | plastid | 17.54 | 46.95 |
| OQU91217 | Sorghum | plastid | 19.82 | 45.94 |
| KRH04500 | Soybean | cytosol | 11.75 | 23.93 |
| KRH04498 | Soybean | mitochondrion | 10.18 | 22.22 |
| KRH15679 | Soybean | cytosol | 4.74 | 21.26 |
| KRH67917 | Soybean | cytosol | 12.28 | 20.41 |
| KRG99418 | Soybean | cytosol, extracellular, plastid | 2.98 | 19.54 |
| KRH19247 | Soybean | cytosol, endoplasmic reticulum | 10.88 | 19.31 |
| KRH02663 | Soybean | cytosol, nucleus | 10.7 | 19.0 |
| KRH28415 | Soybean | nucleus | 17.37 | 17.74 |
| KRH33352 | Soybean | plastid | 7.72 | 17.32 |
| KRH61363 | Soybean | nucleus | 17.19 | 17.25 |
| KRH58014 | Soybean | nucleus | 18.42 | 16.83 |
| KRH52333 | Soybean | nucleus | 18.6 | 15.99 |
| KRH61671 | Soybean | nucleus | 18.42 | 15.7 |
| KRH52050 | Soybean | cytosol, nucleus, peroxisome | 16.84 | 15.02 |
| KRH05348 | Soybean | nucleus | 16.84 | 14.59 |
| KRG88454 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 10.53 | 13.39 |
| KRG94333 | Soybean | cytosol | 4.56 | 12.87 |
| KRH04503 | Soybean | nucleus | 6.84 | 11.68 |
| KRG96051 | Soybean | nucleus | 16.49 | 9.96 |
| KRH03286 | Soybean | nucleus | 15.26 | 9.9 |
| KRH67774 | Soybean | nucleus, plastid | 16.32 | 9.86 |
| KRH57076 | Soybean | plasma membrane | 14.56 | 9.81 |
Protein Annotations
| Gene3D:1.10.720.150 | EntrezGene:100788948 | MapMan:16.4.1.3.2 | Gene3D:2.130.10.10 | EMBL:ACUP02006072 | ncoils:Coil |
| InterPro:G-protein_beta_WD-40_rep | EnsemblPlantsGene:GLYMA_10G000800 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0017070 | GO:GO:0030621 |
| GO:GO:0046540 | UniProt:I1L7B7 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:IPR036285 |
| EnsemblPlants:KRH31616 | ProteinID:KRH31616 | ProteinID:KRH31616.1 | PFAM:PF00400 | PFAM:PF08799 | PRINTS:PR00320 |
| InterPro:PRP4-like | InterPro:PRP4-like_sf | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19846 |
| InterPro:Prp4 | SMART:SM00320 | SMART:SM00500 | SUPFAM:SSF158230 | SUPFAM:SSF50978 | UniParc:UPI000233C1D4 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:92896..99175
Molecular Weight (calculated)
63040.3 Da
IEP (calculated)
5.652
GRAVY (calculated)
-0.498
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEKENTTS AITAEPSVSA SDGQDPVSSV NASLPDPIQP VIPQVIAPSV VPPLAPIPAL PPPRPLAPLP VRPPVIRPPV PQNGEVGSSD SDSDNDDSNA
101: RINQGGGEYE ISEESRLVRE RQEKAMQELM MKRRAAALAV PTNDMAVRAR LRHLGEPITL FGEREMERRD RLRMIMAKLD AEGQLEKLMK AHEEEEAAAS
201: ASIDEAEEEL QYPFYTEGSK ALLDARIYIA KYSLTRAALR IQRAQRRRDD PDEDMDAEMN WALKQAGNLS LEFSEIGDDR PLSGCSFSRD GKWLATCSLT
301: GASKLWSMPK IKKHSSFKGH TERATDVAYS PVHDHLATAS ADRTAKYWNQ GSLLKTFEGH LDRLARIAFH PSGKYLGTAS FDKTWRLWDI ETGDELLLQE
401: GHSRSVYGLA FHNDGSLAAS CGLDSLARVW DLRTGRSILA LEGHVKPVLG ISFSPNGYHL ATGGEDNTCR IWDLRKKKSF YTIPAHSNLI SQVKFEPQEG
501: YFLVTASYDM TAKVWSGRDF KPVKTLSGHE AKVTSVDVLG DGGYIVTVSH DRTIKLWSSN TTDEQAMDVD
101: RINQGGGEYE ISEESRLVRE RQEKAMQELM MKRRAAALAV PTNDMAVRAR LRHLGEPITL FGEREMERRD RLRMIMAKLD AEGQLEKLMK AHEEEEAAAS
201: ASIDEAEEEL QYPFYTEGSK ALLDARIYIA KYSLTRAALR IQRAQRRRDD PDEDMDAEMN WALKQAGNLS LEFSEIGDDR PLSGCSFSRD GKWLATCSLT
301: GASKLWSMPK IKKHSSFKGH TERATDVAYS PVHDHLATAS ADRTAKYWNQ GSLLKTFEGH LDRLARIAFH PSGKYLGTAS FDKTWRLWDI ETGDELLLQE
401: GHSRSVYGLA FHNDGSLAAS CGLDSLARVW DLRTGRSILA LEGHVKPVLG ISFSPNGYHL ATGGEDNTCR IWDLRKKKSF YTIPAHSNLI SQVKFEPQEG
501: YFLVTASYDM TAKVWSGRDF KPVKTLSGHE AKVTSVDVLG DGGYIVTVSH DRTIKLWSSN TTDEQAMDVD
001: MEPNKDDNVS LAATAQISAP PVLQDASSLP GFSAIPPVVP PSFPPPMAPI PMMPHPPVAR PPTFRPPVSQ NGGVKTSDSD SESDDEHIEI SEESKQVRER
101: QEKALQDLLV KRRAAAMAVP TNDKAVRDRL RRLGEPITLF GEQEMERRAR LTQLLTRYDI NGQLDKLVKD HEEDVTPKEE VDDEVLEYPF FTEGPKELRE
201: ARIEIAKFSV KRAAVRIQRA KRRRDDPDED MDAETKWALK HAKHMALDCS NFGDDRPLTG CSFSRDGKIL ATCSLSGVTK LWEMPQVTNT IAVLKDHKER
301: ATDVVFSPVD DCLATASADR TAKLWKTDGT LLQTFEGHLD RLARVAFHPS GKYLGTTSYD KTWRLWDINT GAELLLQEGH SRSVYGIAFQ QDGALAASCG
401: LDSLARVWDL RTGRSILVFQ GHIKPVFSVN FSPNGYHLAS GGEDNQCRIW DLRMRKSLYI IPAHANLVSQ VKYEPQEGYF LATASYDMKV NIWSGRDFSL
501: VKSLAGHESK VASLDITADS SCIATVSHDR TIKLWTSSGN DDEDEEKETM DIDL
101: QEKALQDLLV KRRAAAMAVP TNDKAVRDRL RRLGEPITLF GEQEMERRAR LTQLLTRYDI NGQLDKLVKD HEEDVTPKEE VDDEVLEYPF FTEGPKELRE
201: ARIEIAKFSV KRAAVRIQRA KRRRDDPDED MDAETKWALK HAKHMALDCS NFGDDRPLTG CSFSRDGKIL ATCSLSGVTK LWEMPQVTNT IAVLKDHKER
301: ATDVVFSPVD DCLATASADR TAKLWKTDGT LLQTFEGHLD RLARVAFHPS GKYLGTTSYD KTWRLWDINT GAELLLQEGH SRSVYGIAFQ QDGALAASCG
401: LDSLARVWDL RTGRSILVFQ GHIKPVFSVN FSPNGYHLAS GGEDNQCRIW DLRMRKSLYI IPAHANLVSQ VKYEPQEGYF LATASYDMKV NIWSGRDFSL
501: VKSLAGHESK VASLDITADS SCIATVSHDR TIKLWTSSGN DDEDEEKETM DIDL
Arabidopsis Description
LISLIS [Source:UniProtKB/TrEMBL;Acc:A0A178VMW2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.