CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04500	Soybean	cytosol	76.25	71.07
CDY57442	Canola	cytosol	53.26	63.18
GSMUA_Achr6P34790_001	Banana	extracellular	24.14	40.38
KRH28415	Soybean	nucleus	72.8	34.05
KRH58014	Soybean	nucleus	80.46	33.65
VIT_07s0129g00690.t01	Wine grape	nucleus	75.1	32.83
KRH61363	Soybean	nucleus	67.82	31.16
CDY18648	Canola	cytosol	67.82	30.94
Os07t0405100-01	Rice	cytosol	65.52	30.81
Zm00001d025048_P003	Maize	cytosol	65.9	30.66
TraesCS2D01G235100.1	Wheat	nucleus	65.13	30.58
TraesCS2B01G255700.1	Wheat	nucleus	65.13	30.47
TraesCS2A01G227200.3	Wheat	cytosol	65.13	30.41
HORVU2Hr1G053480.9	Barley	mitochondrion	65.13	30.36
AT5G67320.1	Thale cress	cytosol	70.88	30.18
Bra037118.1-P	Field mustard	cytosol	67.82	28.92
EES11818	Sorghum	nucleus, plastid	66.28	28.74
CDX81324	Canola	cytosol	67.43	28.66
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	64.75	28.26
KRH52050	Soybean	cytosol, nucleus, peroxisome	68.2	27.86
GSMUA_Achr6P34780_001	Banana	cytosol	44.44	24.73
KRG99418	Soybean	cytosol, extracellular, plastid	6.13	18.39
KRH15679	Soybean	cytosol	8.43	17.32
KRH67917	Soybean	cytosol	18.39	13.99
KRH02663	Soybean	cytosol, nucleus	14.94	12.15
KRH19247	Soybean	cytosol, endoplasmic reticulum	14.56	11.84
KRH33352	Soybean	plastid	11.49	11.81
KRH31616	Soybean	nucleus	22.22	10.18
KRH72083	Soybean	nucleus	22.22	10.18
KRG94333	Soybean	cytosol	7.66	9.9
KRH05348	Soybean	nucleus	19.16	7.6
KRH61671	Soybean	nucleus	18.39	7.17
KRH52333	Soybean	nucleus	18.01	7.09
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	10.34	6.03
KRH67774	Soybean	nucleus, plastid	16.48	4.56
KRG96051	Soybean	nucleus	16.48	4.56
KRH03286	Soybean	nucleus	14.18	4.21
KRH04503	Soybean	nucleus	5.36	4.19
KRH57076	Soybean	plasma membrane	13.03	4.02
CDY57444	Canola	cytosol, mitochondrion	3.45	3.1

Protein Annotations

MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A0R0FM47	EMBL:ACUP02010431	EnsemblPlantsGene:GLYMA_17G165700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH04498
ProteinID:KRH04498	ProteinID:KRH04498.1	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EDD0EA	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:

Description

hypothetical protein

Coordinates

chr17:-:15105581..15108330

Molecular Weight (calculated)

29088.8 Da

IEP (calculated)

9.259

GRAVY (calculated)

-0.352

Length

261 amino acids

Sequence
(BLAST)

001: MVLSCVVNQK VSIPRHTVKF VKYRPKGSLN KISKDIQTHY PNKGELKSTL SKHTGPIFAL KWNKKGDYLL TGSVDQSPTL DVDQRNNVSF VTSSTDNMIY
101: VCKIGETRPI KTFAGHQGEV NCVKWDPTGS LLASCSDDIT AKDTYLPDLR EHSKEIYTIR WSPSGSGTNN PNHKLVLASA SFDSTVKLWD VELGKLMYSL
201: DGHSPNGNYL VSGSLDRYMH IWSLRDGKIV KTYTGNGGIF EVCWNKEGDK IAVVLLIIQF A

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.