Factsheet for Os07t0405100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
endoplasmic reticulum 3
plastid 1
cytosol 2
extracellular 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G255700.1	Wheat	nucleus	90.81	90.32
TraesCS2D01G235100.1	Wheat	nucleus	90.45	90.29
TraesCS2A01G227200.3	Wheat	cytosol	90.45	89.8
Zm00001d025048_P003	Maize	cytosol	90.63	89.66
HORVU2Hr1G053480.9	Barley	mitochondrion	86.67	85.89
EES11818	Sorghum	nucleus, plastid	90.63	83.55
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	87.21	80.94
KRH04500	Soybean	cytosol	39.64	78.57
GSMUA_Achr6P34780_001	Banana	cytosol	58.38	69.08
PGSC0003DMT400093628	Potato	cytosol, mitochondrion	43.6	68.56
PGSC0003DMT400039889	Potato	cytosol	7.03	67.24
CDY57442	Canola	cytosol	26.49	66.82
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.3	66.11
Solyc04g078320.2.1	Tomato	cytosol	70.27	65.88
Solyc05g014420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.78	65.68
KRH28415	Soybean	nucleus	65.95	65.59
KRH04498	Soybean	mitochondrion	30.81	65.52
VIT_07s0129g00690.t01	Wine grape	nucleus	69.55	64.66
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.66	64.13
Solyc12g049100.1.1	Tomato	cytosol	40.54	63.74
PGSC0003DMT400093026	Potato	cytosol	58.56	63.6
KRH61363	Soybean	nucleus	64.86	63.38
Solyc12g088630.1.1	Tomato	cytosol	57.66	62.62
Solyc12g088620.1.1	Tomato	cytosol	58.02	61.69
Solyc05g014460.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.31	61.34
KRH58014	Soybean	nucleus	67.93	60.42
CDY18648	Canola	cytosol	61.26	59.44
AT5G67320.1	Thale cress	cytosol	64.14	58.08
Solyc12g088570.1.1	Tomato	cytosol	37.84	57.69
KRH52050	Soybean	cytosol, nucleus, peroxisome	65.41	56.81
Bra037118.1-P	Field mustard	cytosol	62.52	56.7
CDX81324	Canola	cytosol	62.7	56.68
KRH04503	Soybean	nucleus	28.83	47.9
VIT_18s0001g09600.t01	Wine grape	cytosol	38.38	38.94
CDY57444	Canola	cytosol, mitochondrion	20.18	38.62
Os11t0660300-01	Rice	cytosol	12.25	21.05
Os07t0252000-01	Rice	cytosol	13.33	20.96
Os03t0355400-00	Rice	cytosol, nucleus, plastid	16.94	17.94
Os03t0355200-00	Rice	cytosol, nucleus, plastid	16.94	17.94
Os06t0649500-01	Rice	nucleus	19.28	16.36
Os07t0205200-02	Rice	cytosol, nucleus	5.59	12.25
Os04t0592700-01	Rice	nucleus	16.4	10.21
Os03t0151700-01	Rice	nucleus	16.22	9.57

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	EntrezGene:4342987	EMBL:AK111882	ProteinID:BAF21343.1
ProteinID:BAT01089.1	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000118	GO:GO:0003674	GO:GO:0003714
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0006139	GO:GO:0006357	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009987	GO:GO:0016043
GO:GO:0016575	GO:GO:0019538	GO:GO:1903507	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR015943
InterPro:IPR017986	InterPro:LisH	EnsemblPlantsGene:Os07g0405100	EnsemblPlants:Os07t0405100-01	PFAM:PF00400	PFAM:PF08513
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PANTHER:PTHR22846
PANTHER:PTHR22846:SF2	UniProt:Q0D730	SMART:SM00320	SMART:SM00667	SUPFAM:SSF50978	UniParc:UPI0000E12AA2
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015647338.1
SEG:seg	:	:	:	:	:

Description

OsWD40-141Similar to F-box-like/WD-repeat protein ebi. (Os07t0405100-01)

Coordinates

chr7:+:12424105..12440476

Molecular Weight (calculated)

62144.8 Da

IEP (calculated)

5.785

GRAVY (calculated)

-0.647

Length

555 amino acids

Sequence
(BLAST)

001: MGAITSAELN FLIFRYLQES GFIHAAFTLG YEAGIHKGGI DGNLVPPGAL ITIVQKGLQY IELEANTDEN DEDLAKDFAL LEPLEIITKN VEELQQIVKK
101: RKREKTQSDR DKDKGKEKER MEEHERRPGG ERERERHDQE KELEKEKDRA ERDRDQDKEK EKLHTERIDK VKAEEDSLAG GGPTPMDVST TAHEISSADV
201: TVLEGHSSEV FACAWSPAGS LLASGSGDST ARIWTIPDGP CGSITQSSPP GVHVLKHFKG RTNEKSKDVT TLDWNGEGTL LATGSYDGQA RIWNSDGELK
301: QTLFKHKGPI FSLKWNKKGD FLLSGSVDKT AIVWDTKTWE CKQQFEFHSA PTLDVDWRNN NSFATCSTDN MIYVCKIGDQ RPVKSFSGHQ SEVNAIKWDP
401: TGSLLASCSD DWTAKIWSMK QDKCVYDFKE HTKEIYTIRW SPTGPGTNNP NQQLLLASAS FDSTIKLWEV EQGRLLYSLA GHRQPVYSVA FSPGGEYLAS
501: GSLDQCLHIW SVKEGRILKT YRGSGGIFEV CWNKEGSKIA ACFSNNTVCL MDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.