CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037118.1-P	Field mustard	cytosol	99.48	92.97
CDX81324	Canola	cytosol	97.9	91.21
CDY57442	Canola	cytosol	34.09	88.64
KRH04500	Soybean	cytosol	40.56	82.86
AT5G67320.1	Thale cress	cytosol	88.11	82.22
CDY12836	Canola	extracellular, vacuole	11.19	75.29
KRH28415	Soybean	nucleus	66.43	68.1
KRH04498	Soybean	mitochondrion	30.94	67.82
VIT_07s0129g00690.t01	Wine grape	nucleus	69.41	66.5
KRH58014	Soybean	nucleus	71.33	65.38
Zm00001d025048_P003	Maize	cytosol	61.01	62.21
TraesCS2D01G235100.1	Wheat	nucleus	59.79	61.51
Os07t0405100-01	Rice	cytosol	59.44	61.26
TraesCS2A01G227200.3	Wheat	cytosol	59.79	61.18
TraesCS2B01G255700.1	Wheat	nucleus	59.44	60.93
GSMUA_Achr6P34780_001	Banana	cytosol	48.43	59.06
HORVU2Hr1G053480.9	Barley	mitochondrion	57.17	58.39
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	59.79	57.19
EES11818	Sorghum	nucleus, plastid	60.14	57.14
GSMUA_Achr6P34790_001	Banana	extracellular	15.56	57.05
KRH04503	Soybean	nucleus	31.29	53.59
CDY57444	Canola	cytosol, mitochondrion	25.87	51.03
CDY12834	Canola	endoplasmic reticulum, extracellular	15.73	48.39
CDX76728	Canola	cytosol	16.43	27.17
CDY11502	Canola	cytosol	16.26	26.88
CDY14200	Canola	cytosol	12.59	22.43
CDY03567	Canola	cytosol	12.59	22.43
CDX68590	Canola	cytosol	12.59	22.43
CDY43529	Canola	cytosol	12.59	22.43
CDY23845	Canola	nucleus	13.29	17.67
CDY41854	Canola	cytosol	16.43	17.28
CDX79933	Canola	nucleus	12.94	17.25
CDX77335	Canola	cytosol	11.36	15.4
CDY06918	Canola	cytosol, nucleus, peroxisome	12.76	15.05
CDX87098	Canola	nucleus	15.91	13.62
CDY19814	Canola	nucleus	15.91	13.62
CDY14776	Canola	mitochondrion	12.94	13.41
CDY05378	Canola	nucleus	15.38	13.25
CDY05473	Canola	nucleus	15.21	13.06
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	15.38	10.14
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	15.21	10.02
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	15.04	9.87
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	15.04	9.81
CDY54973	Canola	nucleus	14.86	9.13
CDY22910	Canola	nucleus	14.69	9.02
CDY72066	Canola	cytosol	0.35	1.77
CDY43370	Canola	cytosol	0.35	1.77
CDY40782	Canola	cytosol	0.35	1.77
CDY27109	Canola	cytosol	0.35	1.77
CDX92625	Canola	cytosol	0.35	1.77

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A078G1Y6	EnsemblPlants:CDY18648	ProteinID:CDY18648
ProteinID:CDY18648.1	ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00005712001	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH
PFAM:PF00400	PFAM:PF08513	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PFscan:PS50896	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SMART:SM00667	SUPFAM:SSF50978
UniParc:UPI0004EF12C5	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

BnaA09g07470DBnaA09g07470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1Y6]

Coordinates

chrLK032087:+:293501..297323

Molecular Weight (calculated)

64584.8 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.720

Length

572 amino acids

Sequence
(BLAST)

001: MSSLTSVEMN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL VKFVQKGLQY MEMEANLTNG EVETEEDFSF FQPLDLISKD VKELQDMLRE
101: RKRKERDKEK EKDKSKENDR EVEGERSRLR EKDRHEKLKE REKEREREKM ERDKEREREK MERDKERERE KMERETDMVI DQSDKANAGD EDHARSSAAE
201: PMDITMTPAS MPSHIPSSDV RILEGHTSEV CACAWSPSAS LLASGSGDTT ARIWNIPEGP LKSGRTINAL ILKHAKGKSN EKSKDVTTLD WNGEGTLLAT
301: GSCDGQARIW TTNGDLISTL SKHKGPIFSL KWNKKGDYLL TGSVDRTAVV WDVKAEEWKQ QFEFHTGPTL DVDWRNNVSF ATSSTDTFIY LCKIGETRPV
401: KVFAGHQGEV NCVKWDPTGT LLASCSDDST AKIWNIKQHN FVHDLRDHTK EIYTIRWSPT GPGTNNPNKQ LTLASASFDS TVKLWDAELG KMICSLNGHR
501: DAVYSLAFSP NGEYIASGSV DKSIHIWSLK EGKVVKTYTG EGGIFEVCWN KEGNKLAACF ADNSVCVLDF RM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.