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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18648 Canola cytosol 82.22 88.11
Bra037118.1-P Field mustard cytosol 86.95 87.09
CDX81324 Canola cytosol 86.62 86.48
KRH04500 Soybean cytosol 39.15 85.71
CDY57442 Canola cytosol 30.51 85.0
KRH28415 Soybean nucleus 65.42 71.86
VIT_07s0129g00690.t01 Wine grape nucleus 69.49 71.36
KRH04498 Soybean mitochondrion 30.18 70.88
KRH58014 Soybean nucleus 71.29 70.03
Zm00001d025048_P003 Maize cytosol 59.22 64.71
TraesCS2D01G235100.1 Wheat nucleus 58.24 64.21
Os07t0405100-01 Rice cytosol 58.08 64.14
TraesCS2A01G227200.3 Wheat cytosol 58.24 63.86
TraesCS2B01G255700.1 Wheat nucleus 57.75 63.44
GSMUA_Achr6P34780_001 Banana cytosol 47.63 62.26
HORVU2Hr1G053480.9 Barley mitochondrion 55.46 60.71
EES11818 Sorghum nucleus, plastid 58.4 59.47
GSMUA_Achr6P34790_001 Banana extracellular 15.01 58.97
Zm00001d004383_P001 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 57.42 58.86
KRH04503 Soybean nucleus 31.97 58.68
CDY57444 Canola cytosol, mitochondrion 25.61 54.14
AT2G26060.1 Thale cress cytosol 15.66 27.27
AT4G32990.1 Thale cress cytosol 14.36 26.83
AT2G05720.1 Thale cress cytosol 9.46 21.01
AT4G29830.1 Thale cress cytosol 10.93 20.87
AT2G41500.1 Thale cress nucleus, plastid 15.66 17.33
AT5G25150.1 Thale cress nucleus 13.87 12.71
AT5G16750.1 Thale cress cytosol, mitochondrion, nucleus, plastid 14.03 9.82
AT3G21540.1 Thale cress nucleus 13.38 8.59
Protein Annotations
Gene3D:1.20.960.30MapMan:12.3.2.1.4.3Gene3D:2.130.10.10EntrezGene:836867UniProt:A0A178UQT7ProteinID:AED98328.1
EMBL:AK221483ArrayExpress:AT5G67320EnsemblPlantsGene:AT5G67320RefSeq:AT5G67320TAIR:AT5G67320RefSeq:AT5G67320-TAIR-G
EnsemblPlants:AT5G67320.1TAIR:AT5G67320.1EMBL:AY057698EMBL:AY143932Unigene:At.6493ProteinID:BAB09017.1
ncoils:CoilInterPro:G-protein_beta_WD-40_repGO:GO:0000118GO:GO:0003674GO:GO:0003714GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005654
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006357GO:GO:0006464GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009409GO:GO:0009628GO:GO:0009987
GO:GO:0016043GO:GO:0016575GO:GO:0019538GO:GO:0080008GO:GO:1903507Symbol:HOS15
InterPro:IPR001680InterPro:IPR006594InterPro:IPR015943InterPro:IPR017986InterPro:LisHRefSeq:NP_201533.1
ProteinID:OAO96406.1PFAM:PF00400PFAM:PF08513PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281PRINTS:PR00320ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PFscan:PS50896
PANTHER:PTHR22846PANTHER:PTHR22846:SF2UniProt:Q9FN19SMART:SM00320SMART:SM00667SUPFAM:SSF50978
UniParc:UPI00000ABEF3InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
SEG:seg:::::
Description
HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
Coordinates
chr5:+:26857154..26861119
Molecular Weight (calculated)
69775.9 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.802
Length
613 amino acids
Sequence
(BLAST)
001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.