Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11502 | Canola | cytosol | 85.23 | 86.71 |
| Bra007771.1-P | Field mustard | cytosol | 84.94 | 86.42 |
| CDX76728 | Canola | cytosol | 84.94 | 86.42 |
| VIT_08s0007g03360.t01 | Wine grape | cytosol | 72.73 | 74.42 |
| AT4G32990.1 | Thale cress | cytosol | 68.18 | 73.17 |
| PGSC0003DMT400043378 | Potato | cytosol | 54.83 | 70.96 |
| KRH67917 | Soybean | cytosol | 68.47 | 70.26 |
| Solyc09g074400.2.1 | Tomato | cytosol | 69.6 | 69.8 |
| GSMUA_Achr5P26190_001 | Banana | cytosol | 67.05 | 67.82 |
| HORVU7Hr1G101230.1 | Barley | cytosol | 61.36 | 63.91 |
| EER98280 | Sorghum | cytosol, nucleus, plastid | 62.5 | 63.77 |
| Zm00001d019299_P001 | Maize | cytosol | 62.5 | 63.04 |
| Os07t0252000-01 | Rice | cytosol | 62.5 | 62.32 |
| TraesCS7D01G435400.1 | Wheat | cytosol | 61.93 | 62.29 |
| TraesCS7B01G346200.1 | Wheat | cytosol, nucleus, plastid | 61.65 | 62.0 |
| TraesCS7A01G446500.1 | Wheat | cytosol | 61.65 | 62.0 |
| TraesCS7B01G346100.1 | Wheat | cytosol | 59.94 | 60.29 |
| TraesCS7D01G435500.1 | Wheat | cytosol | 59.09 | 59.6 |
| TraesCS7A01G446400.2 | Wheat | cytosol | 58.24 | 59.08 |
| KRH33352 | Soybean | plastid | 37.22 | 51.57 |
| CDY41854 | Canola | cytosol | 76.42 | 49.45 |
| Solyc09g009410.2.1 | Tomato | cytosol, nucleus | 46.02 | 46.55 |
| CDX77335 | Canola | cytosol | 49.72 | 41.47 |
| Bra014107.1-P | Field mustard | cytosol, peroxisome, plastid | 67.9 | 37.76 |
| AT4G29830.1 | Thale cress | cytosol | 17.33 | 19.0 |
| AT2G05720.1 | Thale cress | cytosol | 12.78 | 16.3 |
| AT5G67320.1 | Thale cress | cytosol | 27.27 | 15.66 |
| AT2G41500.1 | Thale cress | nucleus, plastid | 19.6 | 12.45 |
| AT5G25150.1 | Thale cress | nucleus | 19.89 | 10.46 |
| AT5G16750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 19.32 | 7.76 |
| AT3G21540.1 | Thale cress | nucleus | 18.47 | 6.81 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:7.11.3.2.1 | EntrezGene:817147 | UniProt:A0A178VR17 | ProteinID:AAC31230.2 | ProteinID:AEC07790.1 |
| ProteinID:AEC07791.1 | ArrayExpress:AT2G26060 | EnsemblPlantsGene:AT2G26060 | RefSeq:AT2G26060 | TAIR:AT2G26060 | RefSeq:AT2G26060-TAIR-G |
| EnsemblPlants:AT2G26060.1 | TAIR:AT2G26060.1 | EMBL:AY085277 | EMBL:AY093154 | Unigene:At.38940 | EMBL:BT003394 |
| InterPro:CIAO1/Cia1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016226 | GO:GO:0097361 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03037 | RefSeq:NP_001031421.1 | RefSeq:NP_565615.1 |
| UniProt:O80990 | ProteinID:OAP08244.1 | PFAM:PF00400 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19920 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000000BFF3 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | Symbol:emb1345 | : |
Description
CIA1Protein CIA1 [Source:UniProtKB/Swiss-Prot;Acc:O80990]
Coordinates
chr2:+:11102223..11105364
Molecular Weight (calculated)
39133.2 Da
IEP (calculated)
4.585
GRAVY (calculated)
-0.414
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLMEKNLEL VEIQKLEGHT DRVWSVAWNP VSSHADGVSP ILASCSGDNT VRIWEQSSLS RSWTCKTVLE ETHTRTVRSC AWSPSGQLLA TASFDGTTGI
101: WKNYGSEFEC ISTLEGHENE VKSVSWNASG SCLATCSRDK SVWIWEVLEG NEYDCAAVLT GHTQDVKMVQ WHPTMDVLFS CSYDNTIKVW WSEDDDGEYQ
201: CVQTLGESNN GHSSTVWSIS FNAAGDKMVT CSDDLTLKIW GTDIAKMQSG EEYAPWIHLC TLSGYHDRTI YSAHWSRDDI IASGAGDNAI RLFVDSKHDS
301: VDGPSYNLLL KKNKAHENDV NSVQWSPGEG NRLLASASDD GMVKIWQLAT KP
101: WKNYGSEFEC ISTLEGHENE VKSVSWNASG SCLATCSRDK SVWIWEVLEG NEYDCAAVLT GHTQDVKMVQ WHPTMDVLFS CSYDNTIKVW WSEDDDGEYQ
201: CVQTLGESNN GHSSTVWSIS FNAAGDKMVT CSDDLTLKIW GTDIAKMQSG EEYAPWIHLC TLSGYHDRTI YSAHWSRDDI IASGAGDNAI RLFVDSKHDS
301: VDGPSYNLLL KKNKAHENDV NSVQWSPGEG NRLLASASDD GMVKIWQLAT KP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.