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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G446400.2 Wheat cytosol 94.84 95.39
TraesCS7B01G346100.1 Wheat cytosol 94.56 94.29
HORVU7Hr1G101230.1 Barley cytosol 84.24 86.98
TraesCS7D01G435400.1 Wheat cytosol 86.53 86.29
Os07t0252000-01 Rice cytosol 79.94 79.04
EER98280 Sorghum cytosol, nucleus, plastid 77.65 78.55
Zm00001d019299_P001 Maize cytosol 78.22 78.22
GSMUA_Achr5P26190_001 Banana cytosol 63.9 64.08
VIT_08s0007g03360.t01 Wine grape cytosol 62.18 63.08
CDX76728 Canola cytosol 61.03 61.56
CDY11502 Canola cytosol 60.74 61.27
Bra007771.1-P Field mustard cytosol 60.46 60.98
KRH67917 Soybean cytosol 59.89 60.93
Solyc09g074400.2.1 Tomato cytosol 60.74 60.4
AT2G26060.1 Thale cress cytosol 59.6 59.09
PGSC0003DMT400043378 Potato cytosol 45.85 58.82
AT4G32990.1 Thale cress cytosol 52.44 55.79
Solyc09g009410.2.1 Tomato cytosol, nucleus 41.55 41.67
KRH33352 Soybean plastid 30.09 41.34
CDY41854 Canola cytosol 53.87 34.56
CDX77335 Canola cytosol 34.1 28.2
Bra014107.1-P Field mustard cytosol, peroxisome, plastid 46.99 25.91
TraesCS4D01G145700.1 Wheat cytosol 16.33 17.7
TraesCS4D01G160600.1 Wheat cytosol, nucleus 20.92 14.34
TraesCS2D01G235100.1 Wheat nucleus 22.06 13.85
TraesCS2D01G182600.1 Wheat cytosol, mitochondrion, nucleus, plastid 20.92 13.47
TraesCS5D01G324200.2 Wheat nucleus 22.35 11.89
TraesCS7D01G496500.1 Wheat nucleus 21.78 11.67
TraesCS7D01G500800.1 Wheat mitochondrion 19.77 7.82
TraesCS2D01G446600.2 Wheat mitochondrion 19.77 7.78
Protein Annotations
Gene3D:2.130.10.10MapMan:7.11.3.2.1InterPro:CIAO1/Cia1InterPro:G-protein_beta_WD-40_repGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016043GO:GO:0016226
GO:GO:0097361InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986HAMAP:MF_03037PFAM:PF00400
PRINTS:PR00320ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19920SMART:SM00320
SUPFAM:SSF50978EnsemblPlantsGene:TraesCS7D01G435500EnsemblPlants:TraesCS7D01G435500.1InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CS
InterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfTIGR:cd00200:::
Description
No Description!
Coordinates
chr7D:-:554586410..554590336
Molecular Weight (calculated)
38233.1 Da
IEP (calculated)
4.517
GRAVY (calculated)
-0.338
Length
349 amino acids
Sequence
(BLAST)
001: MDGGTAELRE THRLVGHADR AWALAWNPNP GAGAGPVLAS CGADKTVRIW KRAPDGAWHC SDVLEGVHES TVRSCAWSPD GKLLADASFD GTTAIWEYSG
101: GDFELVDTLE GHVNEVKSVS WSQSGSMVAT CSRDRAAWIW EILPGNDHEC VDVLEGHTED VKMVQWHPFF DVLVSVSYDN TIRVWADDGD GKWPCVQTLT
201: EAGNSGHSST VWSISFNQKG DRMVTCSDDC TLKIWDASID LSQPTTGEGH ESWRHISTLS GYHGRTIFSV HWSSEGVIAS GAGDDAICLF AEENSMVEGP
301: SYRLILKKEK AHDTDVNCVR WCPQNPRVLA SVSDDGTVKL WELQGDILD
Best Arabidopsis Sequence Match ( AT2G26060.1 )
(BLAST)
001: MDLMEKNLEL VEIQKLEGHT DRVWSVAWNP VSSHADGVSP ILASCSGDNT VRIWEQSSLS RSWTCKTVLE ETHTRTVRSC AWSPSGQLLA TASFDGTTGI
101: WKNYGSEFEC ISTLEGHENE VKSVSWNASG SCLATCSRDK SVWIWEVLEG NEYDCAAVLT GHTQDVKMVQ WHPTMDVLFS CSYDNTIKVW WSEDDDGEYQ
201: CVQTLGESNN GHSSTVWSIS FNAAGDKMVT CSDDLTLKIW GTDIAKMQSG EEYAPWIHLC TLSGYHDRTI YSAHWSRDDI IASGAGDNAI RLFVDSKHDS
301: VDGPSYNLLL KKNKAHENDV NSVQWSPGEG NRLLASASDD GMVKIWQLAT KP
Arabidopsis Description
CIA1Protein CIA1 [Source:UniProtKB/Swiss-Prot;Acc:O80990]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.