Factsheet for AT4G32990.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G26060.1	Thale cress	cytosol	73.17	68.18
VIT_08s0007g03360.t01	Wine grape	cytosol	64.63	61.63
Solyc09g074400.2.1	Tomato	cytosol	62.8	58.69
KRH67917	Soybean	cytosol	60.37	57.73
GSMUA_Achr5P26190_001	Banana	cytosol	60.98	57.47
PGSC0003DMT400043378	Potato	cytosol	47.56	57.35
HORVU7Hr1G101230.1	Barley	cytosol	54.57	52.96
EER98280	Sorghum	cytosol, nucleus, plastid	55.49	52.75
TraesCS7D01G435400.1	Wheat	cytosol	56.1	52.57
TraesCS7D01G435500.1	Wheat	cytosol	55.79	52.44
TraesCS7B01G346200.1	Wheat	cytosol, nucleus, plastid	55.79	52.29
TraesCS7B01G346100.1	Wheat	cytosol	55.79	52.29
TraesCS7A01G446500.1	Wheat	cytosol	55.49	52.0
Zm00001d019299_P001	Maize	cytosol	54.57	51.29
TraesCS7A01G446400.2	Wheat	cytosol	53.66	50.72
Os07t0252000-01	Rice	cytosol	54.57	50.71
Solyc09g009410.2.1	Tomato	cytosol, nucleus	41.46	39.08
KRH33352	Soybean	plastid	28.35	36.61
AT4G29830.1	Thale cress	cytosol	16.16	16.51
AT5G67320.1	Thale cress	cytosol	26.83	14.36
AT2G05720.1	Thale cress	cytosol	8.84	10.51
AT2G41500.1	Thale cress	nucleus, plastid	16.46	9.75
AT5G25150.1	Thale cress	nucleus	17.38	8.52
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	21.04	7.88
AT3G21540.1	Thale cress	nucleus	17.38	5.97

Protein Annotations

Gene3D:2.130.10.10	MapMan:7.11.3.2.1	EntrezGene:829436	ProteinID:AEE86155.1	ArrayExpress:AT4G32990	EnsemblPlantsGene:AT4G32990
RefSeq:AT4G32990	TAIR:AT4G32990	RefSeq:AT4G32990-TAIR-G	EnsemblPlants:AT4G32990.1	TAIR:AT4G32990.1	InterPro:CIAO1/Cia1
UniProt:F4JVW1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	GO:GO:0097361	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	HAMAP:MF_03037	RefSeq:NP_195025.5	PFAM:PF00400	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19920	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0001A7B136	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Source:UniProtKB/TrEMBL;Acc:F4JVW1]

Coordinates

chr4:+:15920230..15922849

Molecular Weight (calculated)

36603.4 Da

IEP (calculated)

4.474

GRAVY (calculated)

-0.391

Length

328 amino acids

Sequence
(BLAST)

001: MKVMDKNLGL EEVQKLEGHT DRVWNVAWNP AADGVIASCS ADKTVRIWEQ SSLTRSWTCK LGHRLGSFDG NTCVWENFAT DSESVSVLRG HESEVKSVSW
101: NASGSLLATC GRDKSVWIWE IQPEEDDEFD TIAVLTGHSE DVKMVLWHPT MDVLFSCSYD NTIKIWCSED EDGDYNCVQT LSELNNGHSS TVWSISFNAA
201: GDKMVTCSDD LAVKIWKTDI SRMQSGEGYV PWTHVCTLSG FHDRTIYSVH WSRDGVIASG AGDDTIQLFV DSDSDSVDGP SYKLLVKKEK AHEMDVNSVQ
301: WAPDKESRLL ASASDDKMVK IWKLASEP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.