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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69423 Canola cytosol, mitochondrion, nucleus, plastid 91.21 92.05
Bra008598.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 90.87 91.71
CDY16982 Canola cytosol, mitochondrion, nucleus, plastid 91.78 91.68
CDY38089 Canola cytosol, mitochondrion, nucleus, plastid 90.75 91.59
CDX85488 Canola cytosol, mitochondrion, nucleus, plastid 90.87 91.39
Bra023582.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 90.53 91.36
KRG88454 Soybean cytosol, mitochondrion, peroxisome, plastid 36.19 70.76
PGSC0003DMT400009959 Potato cytosol 11.07 70.29
VIT_16s0039g01690.t01 Wine grape cytosol 70.89 69.0
KRH03286 Soybean nucleus 65.98 65.76
Solyc03g097160.2.1 Tomato nucleus 64.95 65.33
KRH57076 Soybean plasma membrane 61.42 63.59
TraesCS7D01G500800.1 Wheat mitochondrion 61.99 61.56
TraesCS2A01G447700.1 Wheat mitochondrion 61.99 61.36
TraesCS2D01G446600.2 Wheat mitochondrion 62.1 61.33
TraesCS2B01G468100.1 Wheat nucleus 61.99 61.22
TraesCS7B01G423400.1 Wheat nucleus 61.42 61.14
HORVU2Hr1G106110.11 Barley mitochondrion 61.3 60.95
Os04t0592700-01 Rice nucleus 61.3 60.27
GSMUA_Achr11P... Banana mitochondrion 63.36 60.26
EES12762 Sorghum cytosol 60.84 60.09
Zm00001d002483_P002 Maize mitochondrion 60.39 58.13
Zm00001d026195_P002 Maize cytosol 60.62 57.53
PGSC0003DMT400034226 Potato cytosol 16.21 56.57
AT4G29830.1 Thale cress cytosol 8.11 22.12
AT4G32990.1 Thale cress cytosol 7.88 21.04
AT2G26060.1 Thale cress cytosol 7.76 19.32
AT2G05720.1 Thale cress cytosol 5.71 18.12
AT5G25150.1 Thale cress nucleus 13.01 17.04
AT2G41500.1 Thale cress nucleus, plastid 9.7 15.34
AT3G21540.1 Thale cress nucleus 16.1 14.76
AT5G67320.1 Thale cress cytosol 9.82 14.03
Protein Annotations
MapMan:17.1.3.2.1.3.4Gene3D:2.130.10.10EntrezGene:831538ProteinID:AED92333.1ArrayExpress:AT5G16750EnsemblPlantsGene:AT5G16750
RefSeq:AT5G16750TAIR:AT5G16750RefSeq:AT5G16750-TAIR-GEnsemblPlants:AT5G16750.1TAIR:AT5G16750.1Unigene:At.24110
ProteinID:CAC01839.1ncoils:CoilInterPro:G-protein_beta_WD-40_repGO:GO:0000003GO:GO:0000462GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005730GO:GO:0006139GO:GO:0006364GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009790GO:GO:0009791GO:GO:0009793GO:GO:0009880
GO:GO:0009987GO:GO:0030515GO:GO:0032040GO:GO:0034388GO:GO:0051301InterPro:IPR001680
InterPro:IPR015943InterPro:IPR017986RefSeq:NP_568338.2PFAM:PF00400PFAM:PF08625PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00320
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19854PANTHER:PTHR19854:SF15UniProt:Q9LFE2
InterPro:Quinoprotein_ADH-like_supfamSMART:SM00320SUPFAM:SSF50978SUPFAM:SSF50998InterPro:SSU_processome_Utp13Symbol:TOZ
UniParc:UPI00000A0B15InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
SEG:seg:::::
Description
TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
Coordinates
chr5:-:5504242..5509361
Molecular Weight (calculated)
96702.6 Da
IEP (calculated)
5.841
GRAVY (calculated)
-0.218
Length
876 amino acids
Sequence
(BLAST)
001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.