Factsheet for GSMUA_Achr11P26550_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009959	Potato	cytosol	11.73	78.26
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	33.77	69.42
Os04t0592700-01	Rice	nucleus	66.23	68.46
TraesCS7B01G423400.1	Wheat	nucleus	65.15	68.18
EES12762	Sorghum	cytosol	65.58	68.09
TraesCS7D01G500800.1	Wheat	mitochondrion	65.15	68.03
TraesCS2B01G468100.1	Wheat	nucleus	65.36	67.87
TraesCS2D01G446600.2	Wheat	mitochondrion	65.36	67.87
TraesCS2A01G447700.1	Wheat	mitochondrion	65.15	67.8
HORVU2Hr1G106110.11	Barley	mitochondrion	64.6	67.54
VIT_16s0039g01690.t01	Wine grape	cytosol	65.36	66.89
KRH03286	Soybean	nucleus	62.32	65.3
Zm00001d002483_P002	Maize	mitochondrion	64.5	65.27
Zm00001d026195_P002	Maize	cytosol	64.82	64.68
KRH57076	Soybean	plasma membrane	58.85	64.07
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	60.26	63.36
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	59.07	62.67
Solyc03g097160.2.1	Tomato	nucleus	59.07	62.46
Bra008598.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	58.74	62.33
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	59.28	62.26
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	58.85	62.23
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	58.63	62.21
Bra023582.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	58.63	62.21
PGSC0003DMT400034226	Potato	cytosol	16.61	60.96
GSMUA_Achr9P22400_001	Banana	cytosol	4.89	26.32
GSMUA_Achr2P01810_001	Banana	cytosol	7.49	21.5
GSMUA_Achr5P26190_001	Banana	cytosol	8.03	21.26
GSMUA_Achr11P...	Banana	nucleus	7.93	16.7
GSMUA_Achr7P26980_001	Banana	nucleus	12.81	15.45
GSMUA_Achr11P...	Banana	cytosol, golgi, plastid	15.42	15.11
GSMUA_Achr6P34790_001	Banana	extracellular	2.39	14.1
GSMUA_Achr6P34780_001	Banana	cytosol	7.17	14.07
GSMUA_Achr9P22410_001	Banana	cytosol	4.78	11.8
CDY12834	Canola	endoplasmic reticulum, extracellular	1.09	5.38

Protein Annotations

MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0006139	GO:GO:0006364	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009880	GO:GO:0009987	GO:GO:0032040	GO:GO:0051301
EnsemblPlantsGene:GSMUA_Achr11G26550_001	EnsemblPlants:GSMUA_Achr11P26550_001	EnsemblPlants:GSMUA_Achr11T26550_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0RVN5	PFAM:PF00400	PFAM:PF08625	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15	SMART:SM00320	SUPFAM:SSF50978	InterPro:SSU_processome_Utp13
UniParc:UPI0002950E50	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

Putative Transducin beta-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26550_001]

Coordinates

chr11:+:25345951..25358807

Molecular Weight (calculated)

101516.0 Da

IEP (calculated)

7.522

GRAVY (calculated)

-0.126

Length

921 amino acids

Sequence
(BLAST)

001: MAAPTPLALK RSYRCVSSLQ QFYSGGPFAV SSDGASLACA CGDEIKIVNS SDACVLASLG CDSESVTAFT FSPDGCFLFS AGHSRLIRVW DLSSRKCVRS
101: WKGHDGPAMT MACHSSGGLL ATGGADRKVC VWDVDGGFCT HFFKGHQGVV TCIKFHTDPN RLLLFSGSDD ASVRVWNLES KKCVAVLEKH FSPVTSLALS
201: EDGQILLSAG RDKRRPSKHQ SRCLSSQARL AGTTKFVLKP CLIYSIYVNN SAFKFDFVDV VNKWDLRNYS FNMTIPTYEM VETVCIIQPG NCLSALLETS
301: GHRKPGASAP VYFLTVGERG IVRIWSSEGA VCLYEQQSSD VTLGSDEDDL RRGFLSAVVL PSDLGLLCVT ADQQFLFYCP MKSAGGMLQL NLYKRLVGYN
401: EEILDMKFLG DDEQYLAVAT NLEQVRVYDV ASMSCAYVLV GHTDIVVCID TCISTYGRTM LVTGSKDNSV RLWDVKSRHC IGIGRGHMGA VGAVAFSKKW
501: KNFLVSGSSD RTIKVWSFEG VSEDGDQEIA LKAKAVVAAH DKDINSLAVS PNDSLVCSGS EDHTACIWRL PDLVSVAVLK GHKRGIWSVE FSPVDQCVIT
601: SSGDRTIKIW AVSDGSCLKT FEGHTSSVLR ASFLSRGTQF VSCGGDGLIK LWTIKTSECI ATYDQHEGKI WSLAVGKKTE MLVTGGTDAL INFWHDSTAA
701: DKQEAFLREE EAILRAQELE NAVSDADYTK AIQLAFELRR PHKLFDLFSR LCRRRDVEDP IEKALGGLGK EEIHVLLEYV REWNTKPKLC HVAQAVLFRM
801: FRIFPPTDIV EVKGVSELLE GLIPYSQRHF SRIDRFVRST FLLDYVLTRM SVVDPEETNL PNNGEHPMAS ENGDTDKSST SNEMDSMTSL KKRKSRKSKK
901: GSTKKVKLTK HKNSSTISVE A

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.