Factsheet for TraesCS2A01G447700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G446600.2	Wheat	mitochondrion	98.19	97.97
TraesCS2B01G468100.1	Wheat	nucleus	97.63	97.41
TraesCS7B01G423400.1	Wheat	nucleus	96.5	97.05
TraesCS7D01G500800.1	Wheat	mitochondrion	96.61	96.94
HORVU2Hr1G106110.11	Barley	mitochondrion	96.5	96.94
Os04t0592700-01	Rice	nucleus	85.08	84.51
EES12762	Sorghum	cytosol	83.95	83.77
Zm00001d002483_P002	Maize	mitochondrion	82.26	80.0
Zm00001d026195_P002	Maize	cytosol	82.49	79.09
PGSC0003DMT400009959	Potato	cytosol	10.62	68.12
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	33.33	65.85
GSMUA_Achr11P...	Banana	mitochondrion	67.8	65.15
VIT_16s0039g01690.t01	Wine grape	cytosol	65.08	64.0
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	61.36	61.99
KRH03286	Soybean	nucleus	61.36	61.77
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	60.34	61.52
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	60.45	61.42
Bra023582.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	60.23	61.41
Bra008598.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	60.0	61.18
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	60.0	61.18
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	60.23	60.78
Solyc03g097160.2.1	Tomato	nucleus	59.55	60.51
KRH57076	Soybean	plasma membrane	57.51	60.17
PGSC0003DMT400034226	Potato	cytosol	17.06	60.16
TraesCS4A01G165700.1	Wheat	cytosol, nucleus	7.57	20.81
TraesCS7A01G446400.2	Wheat	cytosol	7.57	19.31
TraesCS5A01G317800.1	Wheat	nucleus	14.01	18.9
TraesCS7A01G446500.1	Wheat	cytosol	7.46	18.86
TraesCS7A01G508300.2	Wheat	nucleus	13.79	18.6
TraesCS4A01G149100.1	Wheat	cytosol, nucleus, plastid	9.83	17.09
TraesCS4A01G370000.1	Wheat	nucleus	16.72	15.74
TraesCS2A01G227200.3	Wheat	cytosol	9.94	15.74
TraesCS2A01G175200.1	Wheat	plastid	9.83	15.73
TraesCS7A01G467500.1	Wheat	nucleus	3.39	12.45
CDY12834	Canola	endoplasmic reticulum, extracellular	1.24	5.91

Protein Annotations

MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0006139	GO:GO:0006364	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009880	GO:GO:0009987	GO:GO:0032040	GO:GO:0051301
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFAM:PF08625	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15	SMART:SM00320
SUPFAM:SSF50978	InterPro:SSU_processome_Utp13	EnsemblPlantsGene:TraesCS2A01G447700	EnsemblPlants:TraesCS2A01G447700.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:696848733..696855046

Molecular Weight (calculated)

96890.4 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.192

Length

885 amino acids

Sequence
(BLAST)

001: MALSQGPKKN YRCDRSLQQF YTGGPFAVGR APRGEGEGEG EGDAEAFFAC ACGSELRVVS AADASVIGEP IDGDSEAVTG IALSPDSRLL FAAGHSKLIR
101: VWDLASRTCI RSWKGHDGPV MAMACHASGG LLATAGADKK VCVWDVDGGF CTHFFRGHTG VVTTIMFHRD PKRLLLFSGS DDGTVRVWNL ESKKCIAVLN
201: AHFSTVTSFA LSEDGLTLLS AGRDKVVNVW DLRKYASKKT IPAYEMIEGV SFIGPGSGIL ACLGVEAAKL KEKTDGYFLT VGERGIVRIW CLESAVCVFE
301: QQSSDVTINS ENEESRRGFT ATTMLPDDQG ILCVTADQQF LFYSCTRTDE GTFQLNLYKR LIGYNDEILD LKFVGEEEQY LAVATNLEQV RVYDVASMSC
401: SYVLAGHTEI VVCLDTCVST SGKTLVVTGS KDNTVRLWDM EKRSCIGTGK GHLGAIGCVA FSKKSKNFFV SGSSDRTIKV WTWDDTLIDA GGEVPLKAKA
501: GVAAHDKDIN SLSVSPNDGL VCSGSEDRTA SIWKLPNLVS SVVLKGHKRG IWSVEFSPVE QCVITSSGDK TVKIWHVADG SCLKTFEGHT SSVLRASFLS
601: RGTQFVSCGS DGLVKLWTIK TNECIATYDK HDGKVWALAI GKKTEMLATG GTDSDLNLWH DCTMEDKQED FLKKEEEVLR GQELENAVSD SDYTRAIQLA
701: FELRRPRRLL ELFSQLCRKA DPEDPIEKAL LGLPKEGLRV LLEYIREWNT KPKFCHVAQF VLFRVLRSLP PTDILEIKGI SELLEGLIPY SQRHFSRVDR
801: LVRSTFLLDY TLTRMSVVDP DVDAGTTKDV TNDSSMDNVE ITPAEPALET PEKPGKKRKS SKTSQSSKKS SKKVKASSNA VSVEA

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.