Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G423400.1 | Wheat | nucleus | 97.62 | 97.84 |
| TraesCS2A01G447700.1 | Wheat | mitochondrion | 96.94 | 96.61 |
| HORVU2Hr1G106110.11 | Barley | mitochondrion | 96.49 | 96.59 |
| TraesCS2D01G446600.2 | Wheat | mitochondrion | 96.94 | 96.39 |
| Os04t0592700-01 | Rice | nucleus | 85.03 | 84.18 |
| EES12762 | Sorghum | cytosol | 83.79 | 83.31 |
| Zm00001d002483_P002 | Maize | mitochondrion | 82.2 | 79.67 |
| Zm00001d026195_P002 | Maize | cytosol | 82.43 | 78.76 |
| PGSC0003DMT400009959 | Potato | cytosol | 10.66 | 68.12 |
| KRG88454 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 33.33 | 65.62 |
| GSMUA_Achr11P... | Banana | mitochondrion | 68.03 | 65.15 |
| VIT_16s0039g01690.t01 | Wine grape | cytosol | 65.08 | 63.78 |
| AT5G16750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 61.56 | 61.99 |
| KRH03286 | Soybean | nucleus | 61.45 | 61.66 |
| CDY38089 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.54 | 61.52 |
| CDX85488 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.66 | 61.42 |
| Bra023582.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 60.43 | 61.41 |
| Bra008598.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 60.09 | 61.06 |
| CDX69423 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.09 | 61.06 |
| CDY16982 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.32 | 60.66 |
| Solyc03g097160.2.1 | Tomato | nucleus | 59.64 | 60.39 |
| KRH57076 | Soybean | plasma membrane | 57.37 | 59.81 |
| PGSC0003DMT400034226 | Potato | cytosol | 17.01 | 59.76 |
| TraesCS4D01G145700.1 | Wheat | cytosol | 7.71 | 21.12 |
| TraesCS7D01G435500.1 | Wheat | cytosol | 7.82 | 19.77 |
| TraesCS7D01G435400.1 | Wheat | cytosol | 7.6 | 19.14 |
| TraesCS5D01G324200.2 | Wheat | nucleus | 13.95 | 18.75 |
| TraesCS7D01G496500.1 | Wheat | nucleus | 13.83 | 18.74 |
| TraesCS4D01G160600.1 | Wheat | cytosol, nucleus | 9.3 | 16.11 |
| TraesCS2D01G182600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 9.86 | 16.05 |
| TraesCS2D01G235100.1 | Wheat | nucleus | 9.75 | 15.47 |
| CDY12834 | Canola | endoplasmic reticulum, extracellular | 1.13 | 5.38 |
Protein Annotations
| MapMan:17.1.3.2.1.3.4 | Gene3D:2.130.10.10 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0032040 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF08625 |
| PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19854 | PANTHER:PTHR19854:SF15 |
| InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:SSU_processome_Utp13 | EnsemblPlantsGene:TraesCS7D01G500800 |
| EnsemblPlants:TraesCS7D01G500800.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| TIGR:cd00200 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:606961230..606967111
Molecular Weight (calculated)
96487.8 Da
IEP (calculated)
6.643
GRAVY (calculated)
-0.207
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSQGPKNN YRCDRSLQQF YTGGPFAVGR APRGQGEGEE AFLACACGSE LRVVSATDAS AIGEPIDGDS EAVTGIALSP DSRLLFAAGH SKLIRVWDLA
101: SRTCIRSWKG HDGPVMAMSC HASGGLLATA GADKKVCVWD VDGGFCTHFF RGHTGVVTTI MFHKDPKRLL LFSGSDDGTV RVWNLESKKC IAVLNAHFST
201: VTSLALSEDG LTLLSAGRDK VVNVWDLRKY ASKKTIPAYE MIEGVSFIGP GSGILACLGA EAAKLKEKTD GYFLTVGERG IVRIWCLESA VCVFEQQSSD
301: VTINSENEES RRGFTATNML PDDQGILCVT ADQQFLFYSC TRTDEGTFQL NLYKRLIGYN DEILDVKFVG EEEQYLAVAT NLEQVRVYDV ASMSCSYVLA
401: GHTEIVVCLD TCVSASGKTL VVTGSKDNTV RLWDMEKRSC IGTGKGHLGA IGCVAFSKKS KNFFVSGSSD RTIKVWTWDD TLIDAGGEVP LKAKAGVAAH
501: DKDINSLSVS PNDGLVCSGS EDRTASIWKL PNLVSSVVLK GHKRGIWSVE FSPVEQCVIT SSGDKTVKIW HVADGSCLKT FEGHTSSVLR ASFLSRGTQF
601: VSCGSDGLVK LWTIKTNECI ATYDRHDGKV WALAVGKKTE MLATGGTDSD LNLWHDCTME DKQEDFLKKE EEVLRGQELE NAVSDSDYTR AIQLAFELRR
701: PRRLLELFSQ LCRKADPEDP IEKALVGLPK EGLRVLLEYI REWNTKPKFC HVAQFVLFRV LRSLPPTDIL ETKGISELLE GLIPYSQRHF SRVDRLVRST
801: FLLDYTLTRM SVVDPDVDGG TTKDVTNDSS MNNAEIAPAE PAQETPEKPG RKRKSSKTTQ SSKKSSKKVK ASYSSAAVSV EA
101: SRTCIRSWKG HDGPVMAMSC HASGGLLATA GADKKVCVWD VDGGFCTHFF RGHTGVVTTI MFHKDPKRLL LFSGSDDGTV RVWNLESKKC IAVLNAHFST
201: VTSLALSEDG LTLLSAGRDK VVNVWDLRKY ASKKTIPAYE MIEGVSFIGP GSGILACLGA EAAKLKEKTD GYFLTVGERG IVRIWCLESA VCVFEQQSSD
301: VTINSENEES RRGFTATNML PDDQGILCVT ADQQFLFYSC TRTDEGTFQL NLYKRLIGYN DEILDVKFVG EEEQYLAVAT NLEQVRVYDV ASMSCSYVLA
401: GHTEIVVCLD TCVSASGKTL VVTGSKDNTV RLWDMEKRSC IGTGKGHLGA IGCVAFSKKS KNFFVSGSSD RTIKVWTWDD TLIDAGGEVP LKAKAGVAAH
501: DKDINSLSVS PNDGLVCSGS EDRTASIWKL PNLVSSVVLK GHKRGIWSVE FSPVEQCVIT SSGDKTVKIW HVADGSCLKT FEGHTSSVLR ASFLSRGTQF
601: VSCGSDGLVK LWTIKTNECI ATYDRHDGKV WALAVGKKTE MLATGGTDSD LNLWHDCTME DKQEDFLKKE EEVLRGQELE NAVSDSDYTR AIQLAFELRR
701: PRRLLELFSQ LCRKADPEDP IEKALVGLPK EGLRVLLEYI REWNTKPKFC HVAQFVLFRV LRSLPPTDIL ETKGISELLE GLIPYSQRHF SRVDRLVRST
801: FLLDYTLTRM SVVDPDVDGG TTKDVTNDSS MNNAEIAPAE PAQETPEKPG RKRKSSKTTQ SSKKSSKKVK ASYSSAAVSV EA
001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV
Arabidopsis Description
TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.