Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12836 | Canola | extracellular, vacuole | 24.73 | 54.12 |
| CDY57444 | Canola | cytosol, mitochondrion | 42.47 | 27.24 |
| CDX81324 | Canola | cytosol | 56.45 | 17.1 |
| CDY18648 | Canola | cytosol | 48.39 | 15.73 |
| CDX79933 | Canola | nucleus | 10.22 | 4.43 |
| CDY23845 | Canola | nucleus | 10.22 | 4.42 |
| CDY06918 | Canola | cytosol, nucleus, peroxisome | 10.75 | 4.12 |
| CDY14776 | Canola | mitochondrion | 10.75 | 3.62 |
| CDY05378 | Canola | nucleus | 10.75 | 3.01 |
| CDX87098 | Canola | nucleus | 10.75 | 2.99 |
| CDY19814 | Canola | nucleus | 10.75 | 2.99 |
| CDY05473 | Canola | nucleus | 10.22 | 2.85 |
| CDX77335 | Canola | cytosol | 6.45 | 2.84 |
| CDY41854 | Canola | cytosol | 6.45 | 2.21 |
| CDX69423 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.68 | 2.07 |
| CDY16982 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.14 | 1.94 |
| CDY03567 | Canola | cytosol | 3.23 | 1.87 |
| CDX68590 | Canola | cytosol | 3.23 | 1.87 |
| CDY14200 | Canola | cytosol | 3.23 | 1.87 |
| CDY43529 | Canola | cytosol | 3.23 | 1.87 |
| CDY38089 | Canola | cytosol, mitochondrion, nucleus, plastid | 8.6 | 1.84 |
| CDX85488 | Canola | cytosol, mitochondrion, nucleus, plastid | 8.6 | 1.84 |
| CDY27109 | Canola | cytosol | 1.08 | 1.77 |
| CDY40782 | Canola | cytosol | 1.08 | 1.77 |
| CDX92625 | Canola | cytosol | 1.08 | 1.77 |
| CDY43370 | Canola | cytosol | 1.08 | 1.77 |
| CDY72066 | Canola | cytosol | 1.08 | 1.77 |
| CDY11502 | Canola | cytosol | 3.23 | 1.73 |
| CDX76728 | Canola | cytosol | 3.23 | 1.73 |
| CDY54973 | Canola | nucleus | 8.6 | 1.72 |
| CDY22910 | Canola | nucleus | 8.6 | 1.72 |
| VIT_16s0039g01690.t01 | Wine grape | cytosol | 6.99 | 1.44 |
| KRH57076 | Soybean | plasma membrane | 5.91 | 1.3 |
| TraesCS2A01G447700.1 | Wheat | mitochondrion | 5.91 | 1.24 |
| KRH03286 | Soybean | nucleus | 5.38 | 1.14 |
| HORVU2Hr1G106110.11 | Barley | mitochondrion | 5.38 | 1.14 |
| TraesCS7D01G500800.1 | Wheat | mitochondrion | 5.38 | 1.13 |
| TraesCS2B01G468100.1 | Wheat | nucleus | 5.38 | 1.13 |
| TraesCS2D01G446600.2 | Wheat | mitochondrion | 5.38 | 1.13 |
| KRG88454 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 2.69 | 1.12 |
| GSMUA_Achr11P... | Banana | mitochondrion | 5.38 | 1.09 |
| TraesCS7B01G423400.1 | Wheat | nucleus | 4.84 | 1.02 |
| Os04t0592700-01 | Rice | nucleus | 4.84 | 1.01 |
| CDY57442 | Canola | cytosol | 1.08 | 0.91 |
| EES12762 | Sorghum | cytosol | 4.3 | 0.9 |
| Zm00001d002483_P002 | Maize | mitochondrion | 4.3 | 0.88 |
| Zm00001d026195_P002 | Maize | cytosol | 4.3 | 0.87 |
Protein Annotations
| EnsemblPlants:CDY12834 | EnsemblPlantsGene:GSBRNA2T00070474001 | Gene3D:1.20.960.30 | ncoils:Coil | PANTHER:PTHR22846 | PANTHER:PTHR22846:SF2 |
| ProteinID:CDY12834 | ProteinID:CDY12834.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EDC6A0 | UniProt:A0A078FIL9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g15990DBnaC07g15990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIL9]
Coordinates
chrLK032027:+:558217..559113
Molecular Weight (calculated)
22367.6 Da
IEP (calculated)
5.364
GRAVY (calculated)
-1.327
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIGVRLLLG FTHATFTIGY EAWINKCNID GNMVPPGALV KFVQKGLHYM EMEANLSNGA ADIDEEFSFF QPLDLISKDV NELQVMLRES KRKERDKEKD
101: RERSKENEKE VEREHDGDCS RMKDKDRHEK QKEREREREK MEREKERERE KIEREALEGE RLKLERERDM KMEKIEKENA YEKKLE
101: RERSKENEKE VEREHDGDCS RMKDKDRHEK QKEREREREK MEREKERERE KIEREALEGE RLKLERERDM KMEKIEKENA YEKKLE
001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM
Arabidopsis Description
HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.