Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G468100.1 | Wheat | nucleus | 98.2 | 98.2 |
| TraesCS2A01G447700.1 | Wheat | mitochondrion | 97.97 | 98.19 |
| TraesCS7D01G500800.1 | Wheat | mitochondrion | 96.39 | 96.94 |
| HORVU2Hr1G106110.11 | Barley | mitochondrion | 96.17 | 96.82 |
| Os04t0592700-01 | Rice | nucleus | 85.46 | 85.07 |
| EES12762 | Sorghum | cytosol | 84.33 | 84.33 |
| Zm00001d002483_P002 | Maize | mitochondrion | 82.64 | 80.55 |
| Zm00001d026195_P002 | Maize | cytosol | 83.09 | 79.85 |
| PGSC0003DMT400009959 | Potato | cytosol | 10.6 | 68.12 |
| KRG88454 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 33.26 | 65.85 |
| GSMUA_Achr11P... | Banana | mitochondrion | 67.87 | 65.36 |
| VIT_16s0039g01690.t01 | Wine grape | cytosol | 65.05 | 64.11 |
| AT5G16750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 61.33 | 62.1 |
| KRH03286 | Soybean | nucleus | 61.22 | 61.77 |
| CDY38089 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.32 | 61.64 |
| CDX85488 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.43 | 61.54 |
| Bra023582.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 60.2 | 61.52 |
| Bra008598.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 59.86 | 61.18 |
| CDX69423 | Canola | cytosol, mitochondrion, nucleus, plastid | 59.86 | 61.18 |
| CDY16982 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.2 | 60.89 |
| Solyc03g097160.2.1 | Tomato | nucleus | 59.53 | 60.62 |
| KRH57076 | Soybean | plasma membrane | 57.16 | 59.93 |
| PGSC0003DMT400034226 | Potato | cytosol | 16.91 | 59.76 |
| TraesCS4D01G145700.1 | Wheat | cytosol | 7.67 | 21.12 |
| TraesCS7D01G435500.1 | Wheat | cytosol | 7.78 | 19.77 |
| TraesCS7D01G435400.1 | Wheat | cytosol | 7.55 | 19.14 |
| TraesCS5D01G324200.2 | Wheat | nucleus | 13.98 | 18.9 |
| TraesCS7D01G496500.1 | Wheat | nucleus | 13.87 | 18.89 |
| TraesCS4D01G160600.1 | Wheat | cytosol, nucleus | 9.36 | 16.31 |
| TraesCS2D01G182600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 9.92 | 16.24 |
| TraesCS2D01G235100.1 | Wheat | nucleus | 9.7 | 15.47 |
| CDY12834 | Canola | endoplasmic reticulum, extracellular | 1.13 | 5.38 |
Protein Annotations
| MapMan:17.1.3.2.1.3.4 | Gene3D:2.130.10.10 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0032040 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF08625 |
| PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19854 | PANTHER:PTHR19854:SF15 |
| InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:SSU_processome_Utp13 | EnsemblPlantsGene:TraesCS2D01G446600 |
| EnsemblPlants:TraesCS2D01G446600.2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| TIGR:cd00200 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:556925382..556931560
Molecular Weight (calculated)
96982.6 Da
IEP (calculated)
6.553
GRAVY (calculated)
-0.190
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSQGPKKN YRCDRSLQQF YTGGPFAVGR GPRGEGEGEG DAETFLACAC GSELRVVSAA DASAIGEPID GDSEAVTGIA LSPDSRLLFA AGHSKLIRVW
101: DLASRTCIRS WKGHDGPVMA MACHASGGLL ATAGADKKVC VWDVDGGFCT HFFRGHTGVV TTIMFHKDPK RLLLFSGSDD GTVRVWNLES KKCIAVLNAH
201: FSTVTSLALS EDGLTLLSAG RDKVVNVWDL RKYASKKTIP AYEMIEGVSF IGPGSGILAC LGVEAAKLKE QTDGYFLTVG ERGIVRIWCL ESAVCVFEQQ
301: SSDVTINSEN EESRRGFTAT TMLPDDQGIL CVTADQQFLF YSCTRTDEGT FQLNLYKRLI GYNDEILDLK FVGEEEQYLA VATNLEQVRV YDVASMSCSY
401: VLAGHTEIVV CLDTCVSASG KTLVVTGSKD NTVRLWDMEK RSCIGTGKGH LGAIGCVAFS KKSKNFFVSG SSDRTIKVWT WDDTLIDAGG EVPLKAKAGV
501: AAHDKDINSL SVSPNDGLVC SGSEDRTASI WKLPNLVSSV VLKGHKRGIW SVEFSPVEQC VITSSGDKTV KIWHVADGSC LKTFEGHTSS VLRASFLSRG
601: TQFVSCGSDG LVKLWTIKTN ECIATYDKHD GKVWALAVGK KTEMLATGGT DSDLNLWHDC TMEDKQEDFL KKEEEVLRGQ ELENAVSDSD YTRAIQLAFE
701: LRRPRRLLEL FSQLCRKADP EDPIEKALLG LPKKGLRVLL EYIREWNTKP KFCHVAQFVL FRVLRSLPPT DILEIKGISE LLEGLIPYSQ RHFSRVDRLV
801: RSTFLLDYTL TRMSVVDPDV DAGTTKDVTN DSSMDNVEIA PTEPALETLE KPGKKRKSSK TSQSSKKSSK KVKASSNGDS KAVSVEV
101: DLASRTCIRS WKGHDGPVMA MACHASGGLL ATAGADKKVC VWDVDGGFCT HFFRGHTGVV TTIMFHKDPK RLLLFSGSDD GTVRVWNLES KKCIAVLNAH
201: FSTVTSLALS EDGLTLLSAG RDKVVNVWDL RKYASKKTIP AYEMIEGVSF IGPGSGILAC LGVEAAKLKE QTDGYFLTVG ERGIVRIWCL ESAVCVFEQQ
301: SSDVTINSEN EESRRGFTAT TMLPDDQGIL CVTADQQFLF YSCTRTDEGT FQLNLYKRLI GYNDEILDLK FVGEEEQYLA VATNLEQVRV YDVASMSCSY
401: VLAGHTEIVV CLDTCVSASG KTLVVTGSKD NTVRLWDMEK RSCIGTGKGH LGAIGCVAFS KKSKNFFVSG SSDRTIKVWT WDDTLIDAGG EVPLKAKAGV
501: AAHDKDINSL SVSPNDGLVC SGSEDRTASI WKLPNLVSSV VLKGHKRGIW SVEFSPVEQC VITSSGDKTV KIWHVADGSC LKTFEGHTSS VLRASFLSRG
601: TQFVSCGSDG LVKLWTIKTN ECIATYDKHD GKVWALAVGK KTEMLATGGT DSDLNLWHDC TMEDKQEDFL KKEEEVLRGQ ELENAVSDSD YTRAIQLAFE
701: LRRPRRLLEL FSQLCRKADP EDPIEKALLG LPKKGLRVLL EYIREWNTKP KFCHVAQFVL FRVLRSLPPT DILEIKGISE LLEGLIPYSQ RHFSRVDRLV
801: RSTFLLDYTL TRMSVVDPDV DAGTTKDVTN DSSMDNVEIA PTEPALETLE KPGKKRKSSK TSQSSKKSSK KVKASSNGDS KAVSVEV
001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV
Arabidopsis Description
TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.