CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	49.05	92.63
KRG94333	Soybean	cytosol	21.39	89.6
KRH03286	Soybean	nucleus	91.61	88.17
PGSC0003DMT400009959	Potato	cytosol	12.77	78.26
VIT_16s0039g01690.t01	Wine grape	cytosol	71.16	66.89
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	63.59	61.42
Bra023582.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	62.88	61.29
Bra008598.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	62.65	61.06
Solyc03g097160.2.1	Tomato	nucleus	61.94	60.16
PGSC0003DMT400034226	Potato	cytosol	17.73	59.76
GSMUA_Achr11P...	Banana	mitochondrion	64.07	58.85
TraesCS7B01G423400.1	Wheat	nucleus	60.05	57.73
HORVU2Hr1G106110.11	Barley	mitochondrion	60.05	57.66
TraesCS2B01G468100.1	Wheat	nucleus	60.4	57.61
TraesCS2A01G447700.1	Wheat	mitochondrion	60.17	57.51
TraesCS7D01G500800.1	Wheat	mitochondrion	59.81	57.37
Os04t0592700-01	Rice	nucleus	60.28	57.24
TraesCS2D01G446600.2	Wheat	mitochondrion	59.93	57.16
EES12762	Sorghum	cytosol	59.46	56.71
Zm00001d002483_P002	Maize	mitochondrion	59.46	55.27
Zm00001d026195_P002	Maize	cytosol	58.87	53.95
KRH02663	Soybean	cytosol, nucleus	6.74	17.76
KRH19247	Soybean	cytosol, endoplasmic reticulum	6.62	17.45
KRH67917	Soybean	cytosol	6.62	16.33
KRH52333	Soybean	nucleus	12.77	16.29
KRH61671	Soybean	nucleus	12.77	16.14
KRH04500	Soybean	cytosol	5.32	16.07
KRH05348	Soybean	nucleus	12.17	15.65
KRH33352	Soybean	plastid	4.37	14.57
KRH72083	Soybean	nucleus	9.81	14.56
KRH31616	Soybean	nucleus	9.81	14.56
KRG96051	Soybean	nucleus	15.96	14.3
KRH67774	Soybean	nucleus, plastid	15.84	14.21
KRH28415	Soybean	nucleus	9.34	14.16
KRG99418	Soybean	cytosol, extracellular, plastid	1.42	13.79
KRH61363	Soybean	nucleus	9.22	13.73
KRH04498	Soybean	mitochondrion	4.02	13.03
KRH58014	Soybean	nucleus	9.57	12.98
KRH52050	Soybean	cytosol, nucleus, peroxisome	9.34	12.36
KRH15679	Soybean	cytosol	1.65	11.02
KRH04503	Soybean	nucleus	4.14	10.48
CDY12834	Canola	endoplasmic reticulum, extracellular	1.3	5.91

Protein Annotations

MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	UniProt:A0A0R0JZQ4	EMBL:ACUP02002812	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_05G038000
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0032040	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KRH57076	ProteinID:KRH57076	ProteinID:KRH57076.1	PFAM:PF00400	PFAM:PF08625
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15
InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:SSU_processome_Utp13	UniParc:UPI0006EDD2ED
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:3377196..3385642

Molecular Weight (calculated)

93472.1 Da

IEP (calculated)

7.479

GRAVY (calculated)

-0.076

Length

846 amino acids

Sequence
(BLAST)

001: MEPLRLKTNY RCVPALQQFY TGGPFVVSSD SSFIACACGE SIKIVDSATA AIRSTLGADS ESFTALALSP DDRLLFSSGH SRQIKVWDLS TLKCVRSWKG
101: HEGPVMCMTC HPSGGLLATG GADRKVLVWD VDGGYCTHYF KGHGGVVSCV MFHPDPEKQL LFSGSDDGGD HATVRVWDIS KTKKKNCIAT LDNHSSAVTS
201: LALSEDGWTL LSAGRDKAGS ISLHLIIFEA VCVLGSGSPF ASSLDSYQQN LKKRDGSQIF YFITVGERGI VRIWNSKGAG CIFEQKTSDV TANIDEDGSR
301: RGFTSAVMLA SDQGLLCVTA DQQFLFYSLE CTEELLQLNL TKRLVGYNEE IVDMKFIGDD EKFLALATNL EQVRVYDLAS MSCSYVLSGH TEIILCLDTC
401: VSSSGKTLIV TGSKDNSVRL WESESANCIG VGIGHMGAVG AIAFSKRKQD FFVSGSSDHT LKVWSMDGLS DNMTMPINLK AKAVVAAHDK DINSVAVAPN
501: DSLVCSGSQD RTACVWRLPD LVSVVVFKGH KRGIWSVEFS PVDQCVVTAS GDKTIRIWAI SDGSCLKTFE GHTSSVLRAL FVTRGTQIVS CGADGLVKLW
601: TVKTNECVAT YDHHEDKMYI YGKTWFKFVA CLMFSKGVLL LLIRSLHADY TKAIQIAFEL RRPHRLFELF AELCRKREAE DHMDRALKGL GSEELRILFN
701: YIREWNTKPK LCYVSQFVLF RVFSIFPPTD IVQIKGIGEF LEGLIPYSQR HFGRIDRLVR STFLLDYILS GMSVIEPQVQ PTESKAELLL QSEIDIPDKE
801: NGIEKKDHTH EITASKKRKS NKSKHGSHKK VKNVAYNKVE SIQLQA

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.