Factsheet for Zm00001d026195_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12762	Sorghum	cytosol	91.98	95.72
Zm00001d002483_P002	Maize	mitochondrion	90.9	92.2
Os04t0592700-01	Rice	nucleus	81.47	84.4
TraesCS2D01G446600.2	Wheat	mitochondrion	79.85	83.09
TraesCS2B01G468100.1	Wheat	nucleus	79.63	82.86
TraesCS7B01G423400.1	Wheat	nucleus	78.66	82.5
TraesCS2A01G447700.1	Wheat	mitochondrion	79.09	82.49
TraesCS7D01G500800.1	Wheat	mitochondrion	78.76	82.43
HORVU2Hr1G106110.11	Barley	mitochondrion	78.66	82.41
PGSC0003DMT400009959	Potato	cytosol	10.62	71.01
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	31.53	64.96
GSMUA_Achr11P...	Banana	mitochondrion	64.68	64.82
VIT_16s0039g01690.t01	Wine grape	cytosol	61.65	63.22
KRH03286	Soybean	nucleus	58.5	61.43
PGSC0003DMT400034226	Potato	cytosol	16.58	60.96
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	57.53	60.62
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	56.34	59.91
Solyc03g097160.2.1	Tomato	nucleus	56.23	59.59
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	56.12	59.47
Bra008598.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.9	59.45
Bra023582.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.9	59.45
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	55.8	59.33
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	56.12	59.06
KRH57076	Soybean	plasma membrane	53.95	58.87
Zm00001d044810_P001	Maize	nucleus	4.01	28.68
Zm00001d025112_P001	Maize	cytosol, nucleus, plastid	5.09	25.68
Zm00001d016330_P001	Maize	extracellular	3.68	23.45
Zm00001d048691_P001	Maize	cytosol, extracellular, mitochondrion	7.37	22.9
Zm00001d053142_P001	Maize	nucleus	3.79	21.74
Zm00001d019299_P001	Maize	cytosol	7.69	20.34
Zm00001d046810_P002	Maize	nucleus	14.63	20.06
Zm00001d029188_P006	Maize	cytosol, nucleus, plastid, vacuole	9.1	15.24
Zm00001d025048_P003	Maize	cytosol	8.99	14.79
Zm00001d027706_P004	Maize	nucleus	14.95	14.39
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	8.78	13.55
Zm00001d043471_P001	Maize	cytosol	4.88	11.78
CDY12834	Canola	endoplasmic reticulum, extracellular	0.87	4.3

Protein Annotations

EntrezGene:103642006	MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	UniProt:A0A1D6JDC4	ProteinID:AQK45828.1	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0032040	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	PFAM:PF08625	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15	SMART:SM00320	SUPFAM:SSF50978	InterPro:SSU_processome_Utp13
UniParc:UPI000844AF6E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
EnsemblPlantsGene:Zm00001d026195	EnsemblPlants:Zm00001d026195_P002	EnsemblPlants:Zm00001d026195_T002	SEG:seg	:	:

Description

Transducin family protein / WD-40 repeat family protein

Coordinates

chr10:-:140696583..140704624

Molecular Weight (calculated)

101181.0 Da

IEP (calculated)

6.387

GRAVY (calculated)

-0.138

Length

923 amino acids

Sequence
(BLAST)

001: MASTHVYKKN YRCDRSLQQF YTGGPFAVGL APGGDGEGGA EAEAFLACAC GGEVRVVSAA DASAIGEPVD GDSEAITALA LSPDSRLIFA AGHSRLIRVW
101: DLASRTCIRS WKGHDGPIMA MACHASGGLL ATAGADKKVC VWDVDGGFCT HFLRGHMGVV TTIMFHKDPK RLLLFSGSED GTVRVWNLET KKCVAVLKEH
201: FSAVTSLALS DDGQTLLSAG RDKIVTAWDI RKYSSKKTIP TYEMIEAVSF IGSGSELLAC LGIELANIKE KSAGYFLTVG ERGVVRVWCL ESCVCVFEQQ
301: TSDVTVNSEN EETRRGFTSA VMLPNDQGLL CVTADQQFLF YCPKRTDDGD FELSLYRRLI GYNDEILDLK FIGEEEQYLA VATNLEQVRV YDVASMSCSY
401: VLAGHTEIVV CIDTCVSASG KTLVVTGSKD HTVRLWDAER KGCIGIGKGH LGAVGSVAFS KKTNNFFVSG SSDRTIKVWT WDDALGDAED EVPLKAKAVV
501: AAHDKDINSL AISPNDGLVC SGSEDRTACI WKLPNLVLSV VLKGHKRGIW SVEFSSVEQC VMTSSGDRTI KIWSVADGSC LKTFEGHTSS VLRASFLSRG
601: TQVISCGSDG LVKLWTIKTN ECIATYDKHD GKVWALAVGM KTEMVATGGT DAVLNLWHDS TMEDKQEDFR KKASETCYCY TLSIYNCKQD ACFWKKNYEI
701: SDIRSCINIE EEVLRGQELE NAVSDSDYAK AIQLAFELRR PHRLLDLFSK LARRADAEDP IEKALLGLPT DGLRVLLEYV REWNTKPKFC HVAQFVLFRL
801: LRSFSPTDIL EIKGISELLE GLIPYSQRHF SRVDRLVRST FLLDYTLMRM SVVDPDVDAG TIKDEMNGSS VENGELAEPR PASPVPQKSS KKRKSGKSGK
901: KGKEKKVKVA SSGLLSKDVS VEP

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.