Factsheet for Zm00001d004383_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025048_P003	Maize	cytosol	87.29	93.05
EES11818	Sorghum	nucleus, plastid	90.97	90.37
Os07t0405100-01	Rice	cytosol	80.94	87.21
TraesCS2B01G255700.1	Wheat	nucleus	79.26	84.95
TraesCS2D01G235100.1	Wheat	nucleus	78.93	84.89
TraesCS2A01G227200.3	Wheat	cytosol	78.93	84.44
HORVU2Hr1G053480.9	Barley	mitochondrion	76.42	81.61
KRH04500	Soybean	cytosol	36.62	78.21
GSMUA_Achr6P34780_001	Banana	cytosol	54.01	68.87
PGSC0003DMT400093628	Potato	cytosol, mitochondrion	39.46	66.86
PGSC0003DMT400039889	Potato	cytosol	6.35	65.52
CDY57442	Canola	cytosol	24.08	65.45
Solyc05g014420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.3	65.14
Solyc04g078320.2.1	Tomato	cytosol	64.21	64.86
KRH04498	Soybean	mitochondrion	28.26	64.75
KRH28415	Soybean	nucleus	60.37	64.7
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.01	64.66
VIT_07s0129g00690.t01	Wine grape	nucleus	63.38	63.48
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.68	63.13
KRH61363	Soybean	nucleus	59.36	62.5
Solyc12g049100.1.1	Tomato	cytosol	36.62	62.04
PGSC0003DMT400093026	Potato	cytosol	52.84	61.84
Solyc12g088630.1.1	Tomato	cytosol	52.01	60.86
Solyc12g088620.1.1	Tomato	cytosol	52.84	60.54
Solyc05g014460.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.31	60.38
KRH58014	Soybean	nucleus	62.88	60.26
CDY18648	Canola	cytosol	57.19	59.79
AT5G67320.1	Thale cress	cytosol	58.86	57.42
Bra037118.1-P	Field mustard	cytosol	58.03	56.7
CDX81324	Canola	cytosol	58.19	56.68
Solyc12g088570.1.1	Tomato	cytosol	34.45	56.59
KRH52050	Soybean	cytosol, nucleus, peroxisome	60.03	56.18
KRH04503	Soybean	nucleus	26.42	47.31
CDY57444	Canola	cytosol, mitochondrion	18.73	38.62
VIT_18s0001g09600.t01	Wine grape	cytosol	34.45	37.66
Zm00001d044810_P001	Maize	nucleus	6.52	30.23
Zm00001d025112_P001	Maize	cytosol, nucleus, plastid	7.02	22.95
Zm00001d016330_P001	Maize	extracellular	5.35	22.07
Zm00001d019299_P001	Maize	cytosol	12.88	22.06
Zm00001d048691_P001	Maize	cytosol, extracellular, mitochondrion	10.37	20.88
Zm00001d029188_P006	Maize	cytosol, nucleus, plastid, vacuole	15.72	17.06
Zm00001d046810_P002	Maize	nucleus	17.73	15.75
Zm00001d043471_P001	Maize	cytosol	10.03	15.71
Zm00001d053142_P001	Maize	nucleus	4.18	15.53
Zm00001d002483_P002	Maize	mitochondrion	13.38	8.79
Zm00001d026195_P002	Maize	cytosol	13.55	8.78
Zm00001d027706_P004	Maize	nucleus	13.21	8.24

Protein Annotations

Gene3D:1.20.960.30	EntrezGene:103646802	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A1D6EF10	ncoils:Coil
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR006594
InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	ProteinID:ONM18803.1	PFAM:PF00400	PFAM:PF08513
PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PANTHER:PTHR22846
PANTHER:PTHR22846:SF2	SMART:SM00320	SMART:SM00667	SUPFAM:SSF50978	UniParc:UPI000220F011	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d004383	EnsemblPlants:Zm00001d004383_P001
EnsemblPlants:Zm00001d004383_T001	SEG:seg	:	:	:	:

Description

leunig-related6 leunig-related6

Coordinates

chr2:+:107689269..107709950

Molecular Weight (calculated)

67230.9 Da

IEP (calculated)

5.870

GRAVY (calculated)

-0.617

Length

598 amino acids

Sequence
(BLAST)

001: MLRETNLSPP SHRAVLALAA APLPRLPPAP AALSPAPPAM GLLTSAELNY LVFRYLQESG FIHAAFTLGY EAGIHKCGID GNAVPPGALI TIVQKGLQYI
101: ELEASSDENY DEVERDFALL EPLEIITKDV EELQQIVKRR KIERSQTELE KDKGKEKERN EEHERRPCGE REREQHEKEK EQVRDKDKSE KDRDHDKEKE
201: KERERQHAER TDKVKHEDDS LVGAGPTPMD VSTTVQEISN TDVTVLEGHS SEVFACAWSP TSSLLASGSG DSTARIWTIP YGPCGSDMQP YSPGVHVLKH
301: FKGRTNEKSK DVTTLDWNGE GTLLATGSYD GQARIWSRDG DLKQTLFKHK GPIFSLKWNK KGDFLLSGSV DKTAIVWDTK TWECKQQFEF HSAPTLDVDW
401: RNNNSFATCS TDNMIYVCKI GEQRPIKAFS GHQSEVNAIK WDPTGSFLAS CSDDWTAKIW SMKQDKCIFD FKEHTKEIYT IRWSPTGPGT NNPNQQLLLA
501: SASFDSTIKL WEVEQGRLLY SLSGHRQPVY SVAFSPDGEY LASGSLDQCL HIWSVKEGRV LKTYRGTGGI FEVCWNIEGT KIAACFSNNT VCVMDFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.