Factsheet for Solyc05g014460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039889	Potato	cytosol	12.17	87.93
Solyc05g014420.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.5	77.57
Solyc12g088540.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.16	72.34
Solyc12g088570.1.1	Tomato	cytosol	60.62	69.78
PGSC0003DMT400088760	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.85	66.94
Solyc12g088620.1.1	Tomato	cytosol	82.1	65.9
Solyc12g049100.1.1	Tomato	cytosol	50.12	59.49
Solyc12g088630.1.1	Tomato	cytosol	68.5	56.16
Solyc04g078320.2.1	Tomato	cytosol	67.78	47.97
Os07t0405100-01	Rice	cytosol	61.34	46.31
Zm00001d025048_P003	Maize	cytosol	61.58	45.99
TraesCS2B01G255700.1	Wheat	nucleus	61.1	45.88
TraesCS2D01G235100.1	Wheat	nucleus	60.86	45.86
TraesCS2A01G227200.3	Wheat	cytosol	61.1	45.8
KRH61363	Soybean	nucleus	61.34	45.25
GSMUA_Achr6P34780_001	Banana	cytosol	49.16	43.92
HORVU2Hr1G053480.9	Barley	mitochondrion	58.23	43.57
EES11818	Sorghum	nucleus, plastid	61.58	42.86
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	60.38	42.31
KRH52050	Soybean	cytosol, nucleus, peroxisome	61.34	40.22
GSMUA_Achr6P34790_001	Banana	extracellular	14.8	39.74
Solyc09g074400.2.1	Tomato	cytosol	17.42	20.8
Solyc12g009030.1.1	Tomato	cytosol, nucleus	13.84	17.96
Solyc07g041080.2.1	Tomato	cytosol, nucleus	13.6	17.65
Solyc09g009410.2.1	Tomato	cytosol, nucleus	14.08	16.95
Solyc04g016510.2.1	Tomato	nucleus	16.71	14.34
Solyc06g065700.2.1	Tomato	nucleus	17.9	10.95
Solyc03g097160.2.1	Tomato	nucleus	16.23	7.81
Solyc10g039190.1.1	Tomato	nucleus	17.18	7.58

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	InterPro:Apc4_WD40_dom	InterPro:G-protein_beta_WD-40_rep	GO:GO:0000118
GO:GO:0003674	GO:GO:0003714	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139	GO:GO:0006357	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016575
GO:GO:0019538	GO:GO:1903507	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR015943	InterPro:IPR017986
UniProt:K4BYG5	InterPro:LisH	PFAM:PF00400	PFAM:PF08513	PFAM:PF12894	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PANTHER:PTHR22846	PANTHER:PTHR22846:SF2
SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:Solyc05g014460.1	EnsemblPlants:Solyc05g014460.1.1	UniParc:UPI00027664CD	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:

Description

No Description!

Coordinates

chr5:+:8305932..8309428

Molecular Weight (calculated)

47088.5 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.470

Length

419 amino acids

Sequence
(BLAST)

001: MASLTSEFLN FIVFRYLFES GFTHAAFTFG YEDNTDMNED FKPLEPMDLI TKSVDELRKI IKDKNEKAQK RNLGGKVRRM LTTNENPQEE QRWTNSTRKK
101: SVNMEGHTSE VFACAWSPER SLLASGSGYA TARIWYIGDG PFNSTIPNVL VLNHLDSQAT EENKDVTSLD WNREGTLLAI GFYDGQARIW KRSGELVSTL
201: NKHKGTIMSL KWNEKGNYLL SGSIDTTAVI WNVKSGESKQ QFGFHSGQLL DVAWRNNDSF ATSCADSVIY VCKVGDNKPV KKFSGHQDPS GSLLASCSDD
301: TTVKIWSMKQ DVCLHDFREH SKEIYTIKWS PTGAGTSNPN QQLLLAREPV YSIAFSPNSE YLASGSVDKC MNIWSVKEAK LVRTYNGDGG IFEVCWNKKG
401: NKVAACFANK KVCVFDLRL

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.