CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037118.1-P	Field mustard	cytosol	97.88	98.2
CDY18648	Canola	cytosol	91.21	97.9
CDY57442	Canola	cytosol	31.76	88.64
AT5G67320.1	Thale cress	cytosol	86.48	86.62
KRH04500	Soybean	cytosol	37.62	82.5
CDY12836	Canola	extracellular, vacuole	10.42	75.29
KRH28415	Soybean	nucleus	63.52	69.89
VIT_07s0129g00690.t01	Wine grape	nucleus	66.78	68.68
KRH58014	Soybean	nucleus	69.06	67.95
KRH04498	Soybean	mitochondrion	28.66	67.43
Zm00001d025048_P003	Maize	cytosol	58.14	63.64
TraesCS2D01G235100.1	Wheat	nucleus	57.49	63.49
TraesCS2A01G227200.3	Wheat	cytosol	57.49	63.15
TraesCS2B01G255700.1	Wheat	nucleus	57.0	62.72
Os07t0405100-01	Rice	cytosol	56.68	62.7
GSMUA_Achr6P34780_001	Banana	cytosol	46.25	60.55
HORVU2Hr1G053480.9	Barley	mitochondrion	54.72	60.0
KRH04503	Soybean	nucleus	32.08	58.98
EES11818	Sorghum	nucleus, plastid	57.33	58.47
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	56.68	58.19
GSMUA_Achr6P34790_001	Banana	extracellular	14.5	57.05
CDY12834	Canola	endoplasmic reticulum, extracellular	17.1	56.45
CDY57444	Canola	cytosol, mitochondrion	26.22	55.52
CDX76728	Canola	cytosol	15.47	27.46
CDY11502	Canola	cytosol	15.31	27.17
CDX68590	Canola	cytosol	11.89	22.74
CDY14200	Canola	cytosol	11.89	22.74
CDY03567	Canola	cytosol	11.89	22.74
CDY43529	Canola	cytosol	11.89	22.74
CDY23845	Canola	nucleus	13.03	18.6
CDX79933	Canola	nucleus	12.87	18.41
CDY41854	Canola	cytosol	15.47	17.46
CDY06918	Canola	cytosol, nucleus, peroxisome	12.38	15.67
CDX77335	Canola	cytosol	10.75	15.64
CDY14776	Canola	mitochondrion	12.54	13.95
CDX87098	Canola	nucleus	14.82	13.62
CDY19814	Canola	nucleus	14.82	13.62
CDY05378	Canola	nucleus	14.5	13.4
CDY05473	Canola	nucleus	14.33	13.21
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	14.82	10.48
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	14.66	10.37
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	14.5	10.22
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	14.5	10.15
CDY54973	Canola	nucleus	14.33	9.45
CDY22910	Canola	nucleus	14.17	9.34
CDY72066	Canola	cytosol	0.33	1.77
CDY43370	Canola	cytosol	0.33	1.77
CDY40782	Canola	cytosol	0.33	1.77
CDY27109	Canola	cytosol	0.33	1.77
CDX92625	Canola	cytosol	0.33	1.77

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	EnsemblPlants:CDX81324	ProteinID:CDX81324	ProteinID:CDX81324.1
ncoils:Coil	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00134860001
InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	PFAM:PF00400
PFAM:PF08513	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896
PANTHER:PTHR22846	PANTHER:PTHR22846:SF2	SMART:SM00320	SMART:SM00667	SUPFAM:SSF50978	UniParc:UPI0004EE03D6
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

BnaC09g07350D

Coordinates

chrLK031824:-:1005668..1009525

Molecular Weight (calculated)

69967.1 Da

IEP (calculated)

5.746

GRAVY (calculated)

-0.848

Length

614 amino acids

Sequence
(BLAST)

001: MSSLTSVEMN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL VKFVQKGLQY MEMEANLTNG EMETEEDFSF FQPLDLISKD VKELQDMLRE
101: RKRKERDKEK EKEKDKSKEN DREVEGERSR IKEKDRHEKL KEREKERERE KMEREKERER EKMEREKERE REKMERETFE RERERMKLER ERETERERER
201: EKMEREKAQE KQVGDGDRDM VIDQSDKANA GDEDHARSSA AEPMDIAMTP ASMPSHIPSS DVRILEGHTS EVCACAWSPS ASLLASGSGD TTARIWNIPE
301: GPLKSSRSIS ALILKHAKGK SNEKSKDVTT LDWNGEGTLL ATGSCDGQAR IWTTNGDLIS TLSKHKGPIF SLKWNKNGDY LLTGSVDRTA VVWDVKAEEW
401: KQQFEFHTGP TLDVDWRNNV SFATSSTDTF IYLCKIGETR PVKVFAGHQG EVNCVKWDPT GTLLASCSDD STAKIWNIKQ HNFVHDLRDH TKEIYTIRWS
501: PTGPGTNNPN KQLTLASASF DSTVKLWDAE LGKMICSLNG HRDAVYSLAF SPNGEYIASG SVDKSIHIWS LKEGKVVKTY TGEGGIFEVC WNKEGNKLAA
601: CFADNSVCVL DFRM

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.