CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12836	Canola	extracellular, vacuole	15.86	54.12
CDY12834	Canola	endoplasmic reticulum, extracellular	27.24	42.47
KRH04503	Soybean	nucleus	43.45	37.72
CDX81324	Canola	cytosol	55.52	26.22
CDY18648	Canola	cytosol	51.03	25.87
GSMUA_Achr6P34780_001	Banana	cytosol	41.72	25.8
AT5G67320.1	Thale cress	cytosol	54.14	25.61
KRH28415	Soybean	nucleus	41.03	21.33
VIT_07s0129g00690.t01	Wine grape	nucleus	43.45	21.11
KRH58014	Soybean	nucleus	44.14	20.51
TraesCS2D01G235100.1	Wheat	nucleus	38.97	20.32
Os07t0405100-01	Rice	cytosol	38.62	20.18
TraesCS2A01G227200.3	Wheat	cytosol	38.28	19.86
Zm00001d025048_P003	Maize	cytosol	38.28	19.79
TraesCS2B01G255700.1	Wheat	nucleus	37.93	19.71
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	38.62	18.73
EES11818	Sorghum	nucleus, plastid	38.28	18.44
HORVU2Hr1G053480.9	Barley	mitochondrion	34.14	17.68
CDX76728	Canola	cytosol	8.28	6.94
CDX77335	Canola	cytosol	10.0	6.87
CDY11502	Canola	cytosol	7.93	6.65
CDX79933	Canola	nucleus	9.31	6.29
CDY23845	Canola	nucleus	9.31	6.28
CDY41854	Canola	cytosol	10.0	5.33
CDY06918	Canola	cytosol, nucleus, peroxisome	8.28	4.95
CDY05378	Canola	nucleus	10.0	4.37
CDX68590	Canola	cytosol	4.83	4.36
CDY43529	Canola	cytosol	4.83	4.36
CDY03567	Canola	cytosol	4.83	4.36
CDY14200	Canola	cytosol	4.83	4.36
CDY14776	Canola	mitochondrion	8.28	4.35
CDY05473	Canola	nucleus	9.66	4.2
CDY19814	Canola	nucleus	9.66	4.19
CDX87098	Canola	nucleus	9.66	4.19
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	12.07	4.03
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	12.07	4.03
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	12.07	4.02
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	12.07	3.99
GSMUA_Achr6P34790_001	Banana	extracellular	2.07	3.85
KRH04498	Soybean	mitochondrion	3.1	3.45
CDY22910	Canola	nucleus	9.31	2.9
CDY54973	Canola	nucleus	9.31	2.9
CDY57442	Canola	cytosol	1.03	1.36
CDX92625	Canola	cytosol	0.34	0.88
CDY40782	Canola	cytosol	0.34	0.88
CDY27109	Canola	cytosol	0.34	0.88
CDY72066	Canola	cytosol	0.34	0.88
CDY43370	Canola	cytosol	0.34	0.88
KRH04500	Soybean	cytosol	0.34	0.36

Protein Annotations

Gene3D:1.20.960.30	MapMan:12.3.2.1.4.3	Gene3D:2.130.10.10	UniProt:A0A078J203	EnsemblPlants:CDY57444	ProteinID:CDY57444
ProteinID:CDY57444.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00022222001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22846
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EF28F8	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

BnaAnng14570DBnaAnng14570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J203]

Coordinates

chrLK033575:-:44542..45960

Molecular Weight (calculated)

32751.9 Da

IEP (calculated)

8.049

GRAVY (calculated)

-0.592

Length

290 amino acids

Sequence
(BLAST)

001: MLGPLCFNFT RFRYVGTYHR LGYSDSVEFG RRRCLQTSVE LNYLIFRYLQ ESGNLLCNLS HCICSDSYKL RGINKCKIDG NMVPPGALVK FVQKAMILLC
101: YLQQGAANID EDFSFFQPLD LISKDVKELQ VMLRERKREE RHKDKDRERS KENDKERMKL EREKAHANQL GDGDRDMAID QNEKENAGDE EHGPSSGRCR
201: TTMTPTSLPS RISNSDVRVL EGHTAEVCAC AWSPSASLLA SGSGDTTARI WSIPESGRSI STLILKHAKG KSNEKCKDVT TLDWNVSSAL

Best Arabidopsis Sequence Match ( AT5G67320.1 )
(BLAST)

001: MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
101: KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
201: EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
301: AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
401: QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
501: TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
601: FADNSVCVLD FRM

Arabidopsis Description

HOS15HOS15 [Source:UniProtKB/TrEMBL;Acc:A0A178UQT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.