Factsheet for Zm00001d002483_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12762	Sorghum	cytosol	91.32	93.69
Zm00001d026195_P002	Maize	cytosol	92.2	90.9
Os04t0592700-01	Rice	nucleus	81.76	83.5
TraesCS2D01G446600.2	Wheat	mitochondrion	80.55	82.64
TraesCS2B01G468100.1	Wheat	nucleus	80.44	82.53
TraesCS2A01G447700.1	Wheat	mitochondrion	80.0	82.26
TraesCS7D01G500800.1	Wheat	mitochondrion	79.67	82.2
HORVU2Hr1G106110.11	Barley	mitochondrion	79.56	82.18
TraesCS7B01G423400.1	Wheat	nucleus	79.45	82.16
PGSC0003DMT400009959	Potato	cytosol	10.66	70.29
KRG88454	Soybean	cytosol, mitochondrion, peroxisome, plastid	31.98	64.96
GSMUA_Achr11P...	Banana	mitochondrion	65.27	64.5
VIT_16s0039g01690.t01	Wine grape	cytosol	62.31	63.0
KRH03286	Soybean	nucleus	59.56	61.66
AT5G16750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	58.13	60.39
PGSC0003DMT400034226	Potato	cytosol	16.59	60.16
Solyc03g097160.2.1	Tomato	nucleus	57.36	59.93
CDY38089	Canola	cytosol, mitochondrion, nucleus, plastid	56.92	59.68
CDX85488	Canola	cytosol, mitochondrion, nucleus, plastid	56.92	59.47
KRH57076	Soybean	plasma membrane	55.27	59.46
Bra023582.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	56.7	59.45
Bra008598.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	56.48	59.22
CDX69423	Canola	cytosol, mitochondrion, nucleus, plastid	56.37	59.1
CDY16982	Canola	cytosol, mitochondrion, nucleus, plastid	56.59	58.72
Zm00001d044810_P001	Maize	nucleus	4.07	28.68
Zm00001d025112_P001	Maize	cytosol, nucleus, plastid	5.05	25.14
Zm00001d016330_P001	Maize	extracellular	3.74	23.45
Zm00001d053142_P001	Maize	nucleus	3.96	22.36
Zm00001d048691_P001	Maize	cytosol, extracellular, mitochondrion	7.25	22.22
Zm00001d019299_P001	Maize	cytosol	7.69	20.06
Zm00001d046810_P002	Maize	nucleus	14.62	19.76
Zm00001d029188_P006	Maize	cytosol, nucleus, plastid, vacuole	9.45	15.61
Zm00001d027706_P004	Maize	nucleus	15.49	14.7
Zm00001d025048_P003	Maize	cytosol	9.01	14.62
Zm00001d004383_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	8.79	13.38
Zm00001d043471_P001	Maize	cytosol	4.95	11.78
CDY12834	Canola	endoplasmic reticulum, extracellular	0.88	4.3

Protein Annotations

EntrezGene:100193557	MapMan:17.1.3.2.1.3.4	Gene3D:2.130.10.10	UniProt:A0A1D6E1H8	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0032040	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
ProteinID:ONM14526.1	ProteinID:ONM14529.1	PFAM:PF00400	PFAM:PF08625	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19854	PANTHER:PTHR19854:SF15	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320
SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:SSU_processome_Utp13	UniParc:UPI000842AD51	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d002483	EnsemblPlants:Zm00001d002483_P002	EnsemblPlants:Zm00001d002483_T002
SEG:seg	:	:	:	:	:

Description

Transducin family protein / WD-40 repeat family protein

Coordinates

chr2:+:13639859..13645975

Molecular Weight (calculated)

99392.8 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.127

Length

910 amino acids

Sequence
(BLAST)

001: MASSSTCVLK KNYRCDRSLQ QFYTGGPFAV GLAPGGDGEG GAEAEAFLAC ACGGEVRVVS SADASAIGEP VDGDSEAITA LALSPDSRLL FAAGHSRLIR
101: AWDLASRACI RSWKGHDGPI MAMACHVSGG LLATAGADKK VCVWDVDGGF CTHFLRGHTG VVTSVMFHKD PKRLLLFSGS EDGTVRVWNL ETKKCVAVLK
201: EHFSAVTSLA LSDDGQTLLS AGRDKIVTAW DIRKYSSKKT IPTYEMIEAV SFIGPGSEFL ACLGIELANK KEKDTAYFLT VGERGVVRIW CLESCLCVFE
301: QQTSDVTVNS ENKETRRGFT SAVMLPNEQG LLCVTADQQF LFYCPKRTDD GTFELSLYRR LIGYNDEILD LKFIGEEEQY LAVATNLEQV RVYDVASMSC
401: SYVLAGHTEI IVCIDTCVSA SGKTLVVTGS KDNTVRLWDA ERKSCIGIGK GHLGAVGSVA FSKKTKDFFV SGSSDRTIKV WTWDNTLGDA EDEVPLKAKA
501: VVAAHDKDIN YLTVSPNDGL VCSGSEDRTA CIWKLPNLVF SVALKGHKRG IWSVEFSPVE QCVMTSSGDR TIKIWSVADG SCLKTFEGHT SSVLRASFLS
601: RGTQVVSCGS DGLVKLWTIK TNECIATYDK HDGKVWALAV GRKTEMVATG GTDAVLNLWH DCTMEDKQED FRKKASETFC DTLVFIIASK MLAFGKTEQE
701: VLRGQELENA VSDSDYAKAI QLAFELRRPH KLLDLFSQLA RRADAEDPIE KALLGLPKDG LRVLLEYARE WNTKPKFCHV AQFVLFRVLR SFSPTDILEI
801: KGISELLEGL IPYSQRHFSR VDRLVRSTFL LDYTLTRMSV VDPDVDAGSI KDEMNGSSVE NGELAEPRPA SPVPEKSSKK RKSGKSSKKG KEKVMKLASS
901: GLGKGVSVEA

Best Arabidopsis Sequence Match ( AT5G16750.1 )
(BLAST)

001: MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG
101: HEGPVMGMAC HASGGLLATA GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT EKKCLAIMEK HFSAVTSIAL
201: SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI
301: TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH
401: KEVVLSLDTC VSSSGNVLIV TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS EDSEEPINLK TRSVVAAHDK
501: DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS
601: CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH
701: KVFELFSGLC RKRDSDEQIV KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL IPYSQRHFSR IDRFVRSSFL
801: LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

Arabidopsis Description

TOZTransducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.