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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P22400_001 Banana cytosol 19.76 88.3
Zm00001d044810_P001 Maize nucleus 14.27 84.5
HORVU0Hr1G022460.1 Barley nucleus 48.95 76.48
KXG20501 Sorghum nucleus 64.4 74.89
TraesCS7B01G416400.1 Wheat nucleus 47.91 74.85
VIT_04s0008g05780.t01 Wine grape nucleus 66.1 74.7
TraesCS5D01G324200.2 Wheat nucleus 63.74 74.24
HORVU7Hr1G113760.2 Barley nucleus 63.74 74.24
TraesCS5A01G317800.1 Wheat nucleus 63.74 74.24
Os06t0649500-01 Rice nucleus 63.48 74.16
TraesCS5B01G318400.1 Wheat nucleus 63.61 74.09
TraesCS7A01G508300.2 Wheat nucleus 63.61 74.09
TraesCS7D01G496500.1 Wheat nucleus 62.57 73.43
Zm00001d046810_P002 Maize nucleus 64.4 73.11
Zm00001d053142_P001 Maize nucleus 15.18 72.05
GSMUA_Achr9P22410_001 Banana cytosol 35.08 71.85
KRH52333 Soybean nucleus 62.04 71.49
Solyc06g065700.2.1 Tomato nucleus 63.74 71.09
KRH61671 Soybean nucleus 62.04 70.85
Zm00001d025112_P001 Maize cytosol, nucleus, plastid 16.88 70.49
AT5G25150.1 Thale cress nucleus 60.6 69.21
CDY19814 Canola nucleus 60.47 69.16
Bra036534.1-P Field mustard nucleus 60.34 69.01
CDX87098 Canola nucleus 59.95 68.56
CDY05473 Canola nucleus 58.9 67.57
Bra020485.1-P Field mustard nucleus 58.77 67.42
CDY05378 Canola nucleus 58.51 67.32
Zm00001d016330_P001 Maize extracellular 12.7 66.9
KRH05348 Soybean nucleus 56.54 65.65
KRG99418 Soybean cytosol, extracellular, plastid 7.33 64.37
KRH15679 Soybean cytosol 8.64 51.97
GSMUA_Achr2P01810_001 Banana cytosol 10.73 25.55
GSMUA_Achr5P26190_001 Banana cytosol 9.82 21.55
GSMUA_Achr6P34790_001 Banana extracellular 4.32 21.15
GSMUA_Achr11P... Banana nucleus 11.39 19.91
GSMUA_Achr6P34780_001 Banana cytosol 8.9 14.5
GSMUA_Achr11P... Banana mitochondrion 15.45 12.81
GSMUA_Achr11P... Banana cytosol, golgi, plastid 13.87 11.28
Protein Annotations
Gene3D:1.25.40.500MapMan:15.3.4.3.1MapMan:15.3.5.3.5Gene3D:2.130.10.10ncoils:CoilInterPro:G-protein_beta_WD-40_rep
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSMUA_Achr7G26980_001EnsemblPlants:GSMUA_Achr7P26980_001EnsemblPlants:GSMUA_Achr7T26980_001
InterPro:IPR001680InterPro:IPR006594InterPro:IPR015943InterPro:IPR017986InterPro:IPR037264InterPro:LisH
UniProt:M0TL34PFAM:PF00400PFAM:PF04494PRINTS:PR00320ScanProsite:PS00678PFscan:PS50082
PFscan:PS50294PFscan:PS50896PANTHER:PTHR19879PANTHER:PTHR19879:SF1SMART:SM00320SUPFAM:SSF160897
SUPFAM:SSF50978InterPro:TFIID_NTD2InterPro:TFIID_NTD2_sfUniParc:UPI000296182EInterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfSEG:seg::
Description
Putative Transcription initiation factor TFIID subunit 5 [Source:GMGC_GENE;Acc:GSMUA_Achr7G26980_001]
Coordinates
chr7:+:28151979..28169454
Molecular Weight (calculated)
85402.8 Da
IEP (calculated)
6.641
GRAVY (calculated)
-0.244
Length
764 amino acids
Sequence
(BLAST)
001: MEEEELQKAV VAYLRKKGFA KTEIALQEEQ QNRLSSSSHP DLPLSRLEND PARYSGGYSK LRSWAYSSLD LYKHELLRVL YSVYIHCFMD LVAEGHMRDA
101: RTFFQTFRED HELTHLRDLQ KLEGILSPSH LEEMELARSL RQNKVKIKIC QYAYDLLLQY LQKTQSLTIL GIINERINFE VSPGQPISIS DDMEVVALVG
201: SNHDQAKQIN QKEVRWGLLE DSVEDRLERA NSDSEKAEAE NKELDPEDTK AINRKRSVDG GKQAAPVKKP KKDKLVGATG KNVRSETSTA PVAPRVKPDL
301: TLPIMPMEVE KAILEDLRNR VQLSSSALPS ICFYTFINAH NGLNCSAISH DGSLVAGGFS DSSLKVWDMS KIGQSAKPVS ITLEGFLKYV EPRDAISNHA
401: CLANQILIVF SQTNWASWLV DFYSLLIVVL PHLAQPDLIC CQPKLSNMEE IFLHAGTQDF YGTYLTCYAC GNFLCCLSFH SILFNLQGEN DSIPSEHFLG
501: TEGEGPYTLF HGHSGPIYSA TFSPLGDFLL SSSSDSTIRL WSTNLNANLV CYKGHNYPVW DVQFSPVGHY FASSSHDRTA RIWSMDRIQP LRIMAGHLSD
601: VDCVQWHANC NYVATGSSDK TVRLWDVQSG ECVRIFIGHR STVLSLAMSP DGRFMASGDE DGTIMMWDLS SGRCISPLMG HSSCVWTLAF SREGSLLASG
701: AADCTVKLWD VTTSMKGQKI EESKPSSINR LRLLKALPTK STPVYTLQFS RRNLLFAAGA LSKC
Best Arabidopsis Sequence Match ( AT5G25150.1 )
(BLAST)
001: MDPEQINEFV VGYLKKKGFS SAAKDLESYH HQNNNGSSFT SVDYHNDPEL TKLIRSFSQQ EDDPTRYREG YSKLRSWAYN SLDLYKHELL RVMYPVFIHC
101: YMDLVGKGHT QEARAFFNSF RKDHEMVHLR DLQKLEGVLS PSHLEEMEFA RSLRKSKVNI KFCQYSYELL LQYLHSTVST LMLGIINEHI NFQVYSGQPT
201: SSSDDIEAVT IVGSFQDTAN HINQKEIQWG LLEDSLEDRL EKTGGLLSDS EKGQGESKDG DADDSKKRST EIGKQGSSLK KLKKDKAGNA TAKVARLETI
301: TVSPAPRVKP ELALPVMSTD VEQSILEDLR NRVQLSSVAM PSVSFYTFVN THNGLNCSSI SHDGSLVAGG FSDSSIKVWD MAKIGQAGSG ALQAENDSSD
401: QSIGPNGRRS YTLLLGHSGP VYSATFSPPG DFVLSSSADT TIRLWSTKLN ANLVCYKGHN YPVWDAQFSP FGHYFASCSH DRTARIWSMD RIQPLRIMAG
501: HLSDVDCVQW HPNCNYIATG SSDKTVRLWD VQTGECVRIF IGHRSMVLSL AMSPDGRYMA SGDEDGTIMM WDLSTARCIT PLMGHNSCVW SLSYSGEGSL
601: LASGSADCTV KLWDVTSSTK LTKAEEKNGN SNRLRSLRTF PTKSTPVHAL RFSRRNLLFA AGAISKPAN
Arabidopsis Description
TAF5Transcription initiation factor TFIID subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6S7B0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.