Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042450_P002 | Maize | cytosol | 95.1 | 95.41 |
| Os01t0906600-01 | Rice | cytosol | 82.84 | 84.64 |
| TraesCS3D01G383400.1 | Wheat | cytosol | 80.72 | 81.12 |
| TraesCS3A01G390800.2 | Wheat | cytosol | 81.37 | 80.84 |
| HORVU3Hr1G088460.2 | Barley | cytosol | 81.21 | 80.55 |
| TraesCS3B01G422600.2 | Wheat | cytosol | 80.39 | 79.87 |
| HORVU3Hr1G088480.1 | Barley | mitochondrion | 81.21 | 76.46 |
| GSMUA_Achr8P09010_001 | Banana | cytosol | 63.24 | 62.12 |
| VIT_17s0000g09890.t01 | Wine grape | cytosol | 59.15 | 55.02 |
| KRH63690 | Soybean | cytosol | 57.68 | 54.81 |
| AT5G63200.1 | Thale cress | cytosol | 57.68 | 54.39 |
| KRH54254 | Soybean | cytosol, nucleus | 56.86 | 54.12 |
| CDY48133 | Canola | cytosol | 56.86 | 52.81 |
| CDY16731 | Canola | cytosol | 56.37 | 52.19 |
| Bra035851.1-P | Field mustard | cytosol | 56.21 | 51.96 |
| PGSC0003DMT400069629 | Potato | cytosol | 55.39 | 51.6 |
| Solyc06g071850.2.1 | Tomato | nucleus | 55.39 | 51.6 |
| Bra007638.1-P | Field mustard | cytosol | 4.25 | 45.61 |
| CDY08125 | Canola | cytosol | 4.58 | 43.75 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.2 | EntrezGene:8056137 | UniProt:C5XFH9 | EnsemblPlants:EES04067 | ProteinID:EES04067 |
| ProteinID:EES04067.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 |
| InterPro:IPR019734 | PFAM:PF07719 | PFAM:PF13181 | PFAM:PF13424 | PFAM:PF14559 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR45523 | SMART:SM00028 | EnsemblPlantsGene:SORBI_3003G394300 | SUPFAM:SSF48452 | unigene:Sbi.1703 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_2 | InterPro:TPR_repeat | UniParc:UPI0001A854C7 | RefSeq:XP_002458947.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:70511397..70517064
Molecular Weight (calculated)
66891.3 Da
IEP (calculated)
5.592
GRAVY (calculated)
-0.267
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MPETHPPPPR PVMLADLNFE PAESDGEDRP PTPTPNPAAT AAVAVAAAPA VTTDSFTRSG NEEGGLMKNV IATKDTDTVE CEDADQHCQG ASAPREEKVS
101: NLKAALVHVA RKMPKNAHAH FMLGLMYQRL GQAQKAIASY EKSTEILLQD EEEVRRPDLL SSVRIHHAQC ILQASMGDSF DEELETGEVD DILAKLKSSV
201: ESDHRQAAVW NILGLVLLRG GQIQSAISVL SSLTAVAPDY LDSLANLGVA YIQSGDLEMS AKCFQELLLK DQNHPAALVN YAVLLLCRYG SLSAGAGGNV
301: STGPYLHQKE ALVVAKECLL AAVKADPRAA SVWVNLANAY YMDGEHRNSK RCLEQAAKLE PNHMPARYAI AVHRIRDAVR SQCSDDQLLW AANEMATVLK
401: EGDPSAVDAP IAWAGLAMAH RAQHEIAAAY DNENINLNDA EERAQYTLKQ AIQEDPDDAV QWHQLGLYNI CMTRFSRSVN FLKAALARSP DCSYAWSNLG
501: IALQLSDDPS SETVYKRALL KSSTQQLHAI FSNLGILYRQ HRNYEFARKM LLRSLELCPG YAPASNNLGL VFVAEGRWED ARSCFEKALQ SDPLLDAAKS
601: NLSKVLALSK KQ
101: NLKAALVHVA RKMPKNAHAH FMLGLMYQRL GQAQKAIASY EKSTEILLQD EEEVRRPDLL SSVRIHHAQC ILQASMGDSF DEELETGEVD DILAKLKSSV
201: ESDHRQAAVW NILGLVLLRG GQIQSAISVL SSLTAVAPDY LDSLANLGVA YIQSGDLEMS AKCFQELLLK DQNHPAALVN YAVLLLCRYG SLSAGAGGNV
301: STGPYLHQKE ALVVAKECLL AAVKADPRAA SVWVNLANAY YMDGEHRNSK RCLEQAAKLE PNHMPARYAI AVHRIRDAVR SQCSDDQLLW AANEMATVLK
401: EGDPSAVDAP IAWAGLAMAH RAQHEIAAAY DNENINLNDA EERAQYTLKQ AIQEDPDDAV QWHQLGLYNI CMTRFSRSVN FLKAALARSP DCSYAWSNLG
501: IALQLSDDPS SETVYKRALL KSSTQQLHAI FSNLGILYRQ HRNYEFARKM LLRSLELCPG YAPASNNLGL VFVAEGRWED ARSCFEKALQ SDPLLDAAKS
601: NLSKVLALSK KQ
001: MDRPETIAVK CEPMTVDSPS RPLKLVVLAD LNFNPPETDD LDSSIPIPTP PPITRLSNEE SHQEGGILTC KEVEPGEVEA KKISKVGKCR SRSKIESSSD
101: CGVDADGDLA NQGVPASREE KISNLKMGLI HVARKMPKNA HAHFILGLMF QRLGQSQKAI PEYEKAEEIL LGCEPEIARP ELLLLVQIHH GQCLLLDGFG
201: DTDSVKELEG EELEEILSKL KDSIKLDVRQ AAVWNTLGLM LLKAGCLMSA ISVLSSLLAL VPDNYDCLAN LGVAYLQSGD MELSAKCFQD LVLKDHNHPA
301: ALINYAAELL CKHSSTVAGA GANGGADASE DQKAPMNVAK ECLLAALRSD PKSAHAWVNL ANSYYMMGDH RSSSKCLEKA AKLDPNCMAT RFAVAVQRIK
401: DAERSQDASD QLSWAGNEMA SVIREGESVP IDPPIAWAGL AMAHKAQHEI AAAFVADRNE LTEMEERAVY SLKQAVTEDP EDAVRWHQLG LHSLCSQQYK
501: LSQKYLKAAV GRSRECSYAW SNLGISLQLS DEHSEAEEVY KRALTVSKED QAHAILSNLG NLYRQKKQYE VSKAMFSKAL ELKPGYAPAY NNLGLVFVAE
601: RRWEEAKSCF EKSLEADSLL DAAQSNLLKA TTMSRLCTCF SSSTVVRDS
101: CGVDADGDLA NQGVPASREE KISNLKMGLI HVARKMPKNA HAHFILGLMF QRLGQSQKAI PEYEKAEEIL LGCEPEIARP ELLLLVQIHH GQCLLLDGFG
201: DTDSVKELEG EELEEILSKL KDSIKLDVRQ AAVWNTLGLM LLKAGCLMSA ISVLSSLLAL VPDNYDCLAN LGVAYLQSGD MELSAKCFQD LVLKDHNHPA
301: ALINYAAELL CKHSSTVAGA GANGGADASE DQKAPMNVAK ECLLAALRSD PKSAHAWVNL ANSYYMMGDH RSSSKCLEKA AKLDPNCMAT RFAVAVQRIK
401: DAERSQDASD QLSWAGNEMA SVIREGESVP IDPPIAWAGL AMAHKAQHEI AAAFVADRNE LTEMEERAVY SLKQAVTEDP EDAVRWHQLG LHSLCSQQYK
501: LSQKYLKAAV GRSRECSYAW SNLGISLQLS DEHSEAEEVY KRALTVSKED QAHAILSNLG NLYRQKKQYE VSKAMFSKAL ELKPGYAPAY NNLGLVFVAE
601: RRWEEAKSCF EKSLEADSLL DAAQSNLLKA TTMSRLCTCF SSSTVVRDS
Arabidopsis Description
Tetratricopeptide repeat (TPR)-containing protein [Source:UniProtKB/TrEMBL;Acc:Q67YJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.