CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10635	Sorghum	mitochondrion	99.51	99.51
Zm00001d025240_P002	Maize	mitochondrion	97.27	97.27
Zm00001d003947_P005	Maize	mitochondrion	97.76	95.79
Os04t0390000-02	Rice	mitochondrion	94.34	95.18
TraesCS2B01G301400.2	Wheat	unclear	93.56	94.39
TraesCS2D01G283300.2	Wheat	golgi	93.37	94.19
TraesCS2A01G284400.1	Wheat	nucleus	93.37	94.19
HORVU2Hr1G070090.1	Barley	mitochondrion	88.39	87.28
GSMUA_Achr10P...	Banana	mitochondrion	82.73	85.23
CDY45626	Canola	mitochondrion	74.93	84.96
CDY08754	Canola	mitochondrion	74.83	84.85
VIT_13s0019g00510.t01	Wine grape	mitochondrion	77.37	84.72
CDY53693	Canola	mitochondrion	73.85	84.2
CDY62385	Canola	mitochondrion	73.76	84.09
CDY13078	Canola	cytosol, mitochondrion	73.37	83.65
CDY29088	Canola	cytosol, mitochondrion	73.37	83.65
PGSC0003DMT400071319	Potato	mitochondrion	83.12	83.53
Solyc04g011350.2.1	Tomato	plastid	83.02	83.43
Bra024417.1-P	Field mustard	mitochondrion	82.44	83.33
Solyc05g054640.2.1	Tomato	nucleus, unclear	77.07	82.81
PGSC0003DMT400060466	Potato	mitochondrion	82.15	82.63
AT5G65750.1	Thale cress	mitochondrion	82.54	82.54
KRG90561	Soybean	mitochondrion	81.76	82.08
AT3G55410.2	Thale cress	mitochondrion	81.27	81.91
Bra003211.1-P	Field mustard	mitochondrion	81.17	81.89
Bra027582.1-P	Field mustard	mitochondrion	80.2	80.67
KRH01603	Soybean	nucleus	80.59	80.59
KRH70503	Soybean	nucleus	80.2	79.88
KRH36194	Soybean	cytosol, mitochondrion	12.39	71.35

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EntrezGene:8070830	UniProt:C5YET5
InterPro:DH_E1	EnsemblPlants:EES10634	ProteinID:EES10634	ProteinID:EES10634.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004591	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016624	GO:GO:0030976	GO:GO:0045252	GO:GO:0055114	InterPro:KGD_C	PFAM:PF00676
PFAM:PF02779	PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4
MetaCyc:PWY-5084	SMART:SM00861	EnsemblPlantsGene:SORBI_3006G052500	SUPFAM:SSF52518	unigene:Sbi.20645	InterPro:THDP-binding
TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI0001A86A0F	RefSeq:XP_002446306.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:38422059..38429199

Molecular Weight (calculated)

116317.0 Da

IEP (calculated)

6.840

GRAVY (calculated)

-0.468

Length

1025 amino acids

Sequence
(BLAST)

0001: MGLFRAASGL ARVALRRNLS RAAASPFAGG GGAVPRAAPA RYFHSTRPRW FAAPEPRAVP LSRLTDSFLD GTSSVYLEEL QRAWEADPNS VDESWDNFFR
0101: NFVGQAAATS PGLSGQTIQE SMRLLLLVRA YQVSGHLKAK LDPLGLEERP VPDVLDPAFY GFSEADLDRE FFLGVWRMAG FLEENRPVQT LRSVLERLEQ
0201: AYCGTIGYEY MHIPDREKCN WLRDRIETVN PREYSYDRRQ VMLDRLIWST QFENFLATKW TTAKRFGLEG AETLIPGMKE MFDRAADLGV ESIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTKPVNE GEGLYTGTGD VKYHLGTSYD RPTRGGKQIH LSLVANPSHL EAVDPVVAGK TRAKQYYSND RDRTKNLGVL
0401: LHGDGSFSGQ GVVYETLHLS ALENYTTGGT IHIVVNNQVA FTTDPKSGRS SQYCTDVAKA LDAPIFHVNG DDLEAVVHVC ELAAEWRQTF HSDVVVDIVC
0501: YRRFGHNEID EPSFTQPKMY KVIRNHPSAL EIYQRKLLES GKISKEDIDK LNKKVSTILN EEFQNSKDYV PNKRDWLSAY WTGFKSPEQI SRIRNTGVKP
0601: EILKRVGEAM TTLPENFKPH RAVKKIFDLR RQMIETGEGI DWAVGEALAF ATLIIEGNHV RLSGQDVERG TFSHRHSVIH DQETGEQYYP LDHLVMNQDE
0701: ELFTVSNSSL SEFAVLGFEL GYSMENPNSL VIWEAQFGDF ANGAQVIFDQ FLSSGESKWL RQTGLVVCLP HGYDGQGPEH SSARLERFLQ MSDDNPYVIP
0801: EMDPTLRKQI QECNWQVVNV TTPANYFHVL RRQIHRDFRK PLIVMSPKNL LRHKDCKSNL SEFDDLAGHP GFDKQGTRFK RLIKDQNNHK DLEEGINRLV
0901: LCSGKVYYEL DEERRKAERT DVAICRVEQL CPFPYDLIQR ELKRYPNAEI VWCQEEPMNM GAYSYINPRL LTAMKALGRG GIEDIKYVGR APSAATATGF
1001: YSVHVQEQTE LVKKALQRDP INYPF

Best Arabidopsis Sequence Match ( AT5G65750.1 )
(BLAST)

0001: MVWFRIGSSV AKLAIRRTLS QSRCGSYATR TRVLPCQTRC FHSTILKSKA ESAAPVPRPV PLSKLTDSFL DGTSSVYLEE LQRAWEADPN SVDESWDNFF
0101: RNFVGQASTS PGISGQTIQE SMRLLLLVRA YQVNGHMKAK LDPLGLEKRE IPEDLTPGLY GFTEADLDRE FFLGVWRMSG FLSENRPVQT LRSILSRLEQ
0201: AYCGTIGYEY MHIADRDKCN WLRDKIETPT PRQYNSERRM VIYDRLTWST QFENFLATKW TTAKRFGLEG AESLIPGMKE MFDRSADLGV ENIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTRPVDE VGLYTGTGDV KYHLGTSYDR PTRGGKHLHL SLVANPSHLE AVDPVVIGKT RAKQYYTKDE NRTKNMGILI
0401: HGDGSFAGQG VVYETLHLSA LPNYCTGGTV HIVVNNQVAF TTDPREGRSS QYCTDVAKAL SAPIFHVNAD DIEAVVHACE LAAEWRQTFH SDVVVDLVCY
0501: RRFGHNEIDE PSFTQPKMYK VIRSHPSSLQ IYQEKLLQSG QVTQEDIDKI QKKVSSILNE EYEASKDYIP QKRDWLASHW TGFKSPEQIS RIRNTGVKPE
0601: ILKNVGKAIS TFPENFKPHR GVKRVYEQRA QMIESGEGID WGLGEALAFA TLVVEGNHVR LSGQDVERGT FSHRHSVLHD QETGEEYCPL DHLIKNQDPE
0701: MFTVSNSSLS EFGVLGFELG YSMENPNSLV IWEAQFGDFA NGAQVMFDQF ISSGEAKWLR QTGLVVLLPH GYDGQGPEHS SGRLERFLQM SDDNPYVIPE
0801: MDPTLRKQIQ ECNWQVVNVT TPANYFHVLR RQIHRDFRKP LIVMAPKNLL RHKQCVSNLS EFDDVKGHPG FDKQGTRFKR LIKDQSGHSD LEEGIRRLVL
0901: CSGKVYYELD EERKKSETKD VAICRVEQLC PFPYDLIQRE LKRYPNAEIV WCQEEPMNMG GYQYIALRLC TAMKALQRGN FNDIKYVGRL PSAATATGFY
1001: QLHVKEQTDL VKKALQPDPI TPVIP

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:Q9FLH2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.