Factsheet for Bra024417.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08754	Canola	mitochondrion	89.15	100.0
AT5G65750.1	Thale cress	mitochondrion	95.07	94.05
Bra003211.1-P	Field mustard	mitochondrion	84.71	84.55
VIT_13s0019g00510.t01	Wine grape	mitochondrion	77.61	84.08
PGSC0003DMT400060466	Potato	mitochondrion	84.32	83.91
Solyc05g054640.2.1	Tomato	nucleus, unclear	78.5	83.44
Bra027582.1-P	Field mustard	mitochondrion	83.53	83.12
Os04t0390000-02	Rice	mitochondrion	83.14	82.97
TraesCS2A01G284400.1	Wheat	nucleus	82.94	82.78
TraesCS2B01G301400.2	Wheat	unclear	82.94	82.78
TraesCS2D01G283300.2	Wheat	golgi	82.94	82.78
Solyc04g011350.2.1	Tomato	plastid	83.23	82.75
PGSC0003DMT400071319	Potato	mitochondrion	83.23	82.75
EES10635	Sorghum	mitochondrion	83.33	82.44
EES10634	Sorghum	mitochondrion	83.33	82.44
KRH01603	Soybean	nucleus	83.04	82.15
Zm00001d025240_P002	Maize	mitochondrion	82.74	81.85
KRH70503	Soybean	nucleus	82.84	81.63
KRG90561	Soybean	mitochondrion	81.85	81.29
GSMUA_Achr5P28580_001	Banana	mitochondrion	70.91	81.15
HORVU2Hr1G013170.1	Barley	mitochondrion	78.8	81.03
Zm00001d003947_P005	Maize	mitochondrion	83.53	80.98
GSMUA_Achr10P...	Banana	mitochondrion	79.39	80.9
GSMUA_Achr8P02070_001	Banana	mitochondrion	76.13	79.51
Os07t0695800-01	Rice	mitochondrion	78.7	79.17
Zm00001d036328_P001	Maize	mitochondrion	78.9	78.74
HORVU2Hr1G070090.1	Barley	mitochondrion	80.57	78.71
TraesCS2A01G079500.1	Wheat	golgi	78.8	78.56
TraesCS2D01G076900.1	Wheat	unclear	78.8	78.49
TraesCS2B01G094300.1	Wheat	mitochondrion	78.7	78.31
Zm00001d047592_P005	Maize	cytosol	12.43	70.39
KRH36194	Soybean	cytosol, mitochondrion	11.83	67.42
Zm00001d023552_P001	Maize	plastid	9.37	49.22
Zm00001d021330_P001	Maize	cytosol	8.19	49.11

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EnsemblPlantsGene:Bra024417	EnsemblPlants:Bra024417.1
EnsemblPlants:Bra024417.1-P	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091
GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016624
GO:GO:0030976	GO:GO:0046686	GO:GO:0050897	GO:GO:0055114	InterPro:KGD_C	UniProt:M4E6L3
PFAM:PF00676	PFAM:PF02779	PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152
PANTHER:PTHR23152:SF4	SMART:SM00861	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd
UniParc:UPI000253EEAB	:	:	:	:	:

Description

AT5G65750 (E=0.0) | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative

Coordinates

chrA06:+:15653986..15657594

Molecular Weight (calculated)

114957.0 Da

IEP (calculated)

7.036

GRAVY (calculated)

-0.448

Length

1014 amino acids

Sequence
(BLAST)

0001: MVWFRTGSSL AKLAIRRTLS QSRVLPSSHA RCFHSTSLKS NAAPVPRPVP LSKLTDSFLD GTSSVYLEEL QRAWEADPNS VDESWDNFFR NFVGQAATSP
0101: GISGQTIQES MRLLLLVRAY QVNGHMKAKL DPLGLEEREI PEDLTPGLYG FSEADLDREF FLGVWRMSGF LSENRPVQTL RAILSRLEQA YCGTIGYEYM
0201: HIADRDKCNW LRDKIETPTP RQYNSERRVV IYDRLTWSTQ FENFLATKWT TAKRFGLEGA ESLIPGMKEM FDRAADLGVE NIVIGMPHRG RLNVLGNVVR
0301: KPLRQIFSEF SGGTRPVDEV GLYTGTGDVK YHLGTSYDRP TRGGKHLHLS LLANPSHLEA VDPVVMGKTR AKQYYTKDES RTKNMGILIH GDGSFAGQGV
0401: VYETLHLSAL PNYCTGGTVH IVVNNQVAFT TDPRAGRSSQ YCTDVAKALD APIFHVNADD IEAVVHVCEL AAEWRQTFHS DVVVDLVCYR RFGHNEIDEP
0501: SFTQPKMYKV IRSHPSSLQI YQEKLVESGQ VTKEDIDKIQ KKVSSILNEE FEASKEYIPQ KRDWLASHWT GFKSPEQISR IRNTGVKPEI LKNVGKAIST
0601: FPENFKPHRG VKRVYEQRAQ MIESGEGIDW GLGEALAFAT LVVEGNHVRL SGQDVERGTF SHRHSVLHDQ ETGKEYCPLD HLTMNQDPEM FTVSNSSLSE
0701: FGVLGFELGY SMENPNSLVI WEAQFGDFAN GAQVMFDQFI SSGEAKWLRQ TGLVVLLPHG YDGQGPEHSS GRLERFLQMS DDNPFVIPEM DPTLRKQIQE
0801: CNWQIVNVTT PANYFHVLRR QIHRDFRKPL IVMAPKNLLR HKKCVSNLSE FDDVKGHPGF DKQGTRFKRL IKDQSGHSDL EEGIRRLVLC SGKVYYELDE
0901: ERQKSGTNDI AICRMEQLCP FPYDLIQREL KRYPNAEIVW CQEEPMNMGA YQYIAPRLCT AMKALNRGSF NDIKYVGRLP SAATATGFYQ LHVKEQTDLV
1001: HKALQPDPIT PILP

Best Arabidopsis Sequence Match ( AT5G65750.1 )
(BLAST)

0001: MVWFRIGSSV AKLAIRRTLS QSRCGSYATR TRVLPCQTRC FHSTILKSKA ESAAPVPRPV PLSKLTDSFL DGTSSVYLEE LQRAWEADPN SVDESWDNFF
0101: RNFVGQASTS PGISGQTIQE SMRLLLLVRA YQVNGHMKAK LDPLGLEKRE IPEDLTPGLY GFTEADLDRE FFLGVWRMSG FLSENRPVQT LRSILSRLEQ
0201: AYCGTIGYEY MHIADRDKCN WLRDKIETPT PRQYNSERRM VIYDRLTWST QFENFLATKW TTAKRFGLEG AESLIPGMKE MFDRSADLGV ENIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTRPVDE VGLYTGTGDV KYHLGTSYDR PTRGGKHLHL SLVANPSHLE AVDPVVIGKT RAKQYYTKDE NRTKNMGILI
0401: HGDGSFAGQG VVYETLHLSA LPNYCTGGTV HIVVNNQVAF TTDPREGRSS QYCTDVAKAL SAPIFHVNAD DIEAVVHACE LAAEWRQTFH SDVVVDLVCY
0501: RRFGHNEIDE PSFTQPKMYK VIRSHPSSLQ IYQEKLLQSG QVTQEDIDKI QKKVSSILNE EYEASKDYIP QKRDWLASHW TGFKSPEQIS RIRNTGVKPE
0601: ILKNVGKAIS TFPENFKPHR GVKRVYEQRA QMIESGEGID WGLGEALAFA TLVVEGNHVR LSGQDVERGT FSHRHSVLHD QETGEEYCPL DHLIKNQDPE
0701: MFTVSNSSLS EFGVLGFELG YSMENPNSLV IWEAQFGDFA NGAQVMFDQF ISSGEAKWLR QTGLVVLLPH GYDGQGPEHS SGRLERFLQM SDDNPYVIPE
0801: MDPTLRKQIQ ECNWQVVNVT TPANYFHVLR RQIHRDFRKP LIVMAPKNLL RHKQCVSNLS EFDDVKGHPG FDKQGTRFKR LIKDQSGHSD LEEGIRRLVL
0901: CSGKVYYELD EERKKSETKD VAICRVEQLC PFPYDLIQRE LKRYPNAEIV WCQEEPMNMG GYQYIALRLC TAMKALQRGN FNDIKYVGRL PSAATATGFY
1001: QLHVKEQTDL VKKALQPDPI TPVIP

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:Q9FLH2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.