Factsheet for Zm00001d047592_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021889_P001	Maize	cytosol	15.64	53.85
Zm00001d021330_P001	Maize	cytosol	38.55	40.83
Zm00001d036328_P001	Maize	mitochondrion	97.21	17.13
CDY53693	Canola	mitochondrion	73.74	14.68
CDY62385	Canola	mitochondrion	73.18	14.57
VIT_13s0019g00510.t01	Wine grape	mitochondrion	75.98	14.53
CDY13078	Canola	cytosol, mitochondrion	72.63	14.46
CDY29088	Canola	cytosol, mitochondrion	72.63	14.46
CDY08754	Canola	mitochondrion	70.39	13.94
CDY45626	Canola	mitochondrion	70.39	13.94
Solyc05g054640.2.1	Tomato	nucleus, unclear	72.07	13.52
Zm00001d025240_P002	Maize	mitochondrion	76.54	13.37
AT3G55410.2	Thale cress	mitochondrion	74.86	13.18
Solyc04g011350.2.1	Tomato	plastid	74.86	13.14
PGSC0003DMT400071319	Potato	mitochondrion	74.3	13.04
Bra003211.1-P	Field mustard	mitochondrion	73.74	12.99
Zm00001d003947_P005	Maize	mitochondrion	74.86	12.81
Bra027582.1-P	Field mustard	mitochondrion	72.63	12.76
PGSC0003DMT400060466	Potato	mitochondrion	72.07	12.66
KRG90561	Soybean	mitochondrion	70.95	12.44
Bra024417.1-P	Field mustard	mitochondrion	70.39	12.43
KRH01603	Soybean	nucleus	70.39	12.29
KRH70503	Soybean	nucleus	70.39	12.24
AT5G65750.1	Thale cress	mitochondrion	69.83	12.2
Zm00001d023552_P001	Maize	plastid	1.12	1.04
KRH36194	Soybean	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	EntrezGene:103639200	MapMan:2.3.4.1	InterPro:2oxoglutarate_DH_E1
Gene3D:3.40.50.12470	Gene3D:3.40.50.970	UniProt:A0A1D6PBQ8	ProteinID:AQL07059.1	ProteinID:AQL07060.1	ProteinID:AQL07061.1
ProteinID:AQL07062.1	ProteinID:AQL07064.1	ProteinID:AQL07067.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591
GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0030976	GO:GO:0055114	PFAM:PF02779	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SUPFAM:SSF52518
InterPro:THDP-binding	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI000182C2AA	EnsemblPlantsGene:Zm00001d047592	EnsemblPlants:Zm00001d047592_P005	EnsemblPlants:Zm00001d047592_T005

Description

2-oxoglutarate dehydrogenase E1 component

Coordinates

chr9:-:136558885..136577021

Molecular Weight (calculated)

20421.5 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.494

Length

179 amino acids

Sequence
(BLAST)

001: MYQVIKNHPS SLKLYEQKLL GTSEVMKEDV QRIHDKVNRI LNEEFAKSKD YVPNKRDWLS AYWTGFKSPE QISRVRNTGV KPKILKRVGQ AITTLPENFK
101: PHRAVKKIFE LRAAMIESAQ GIDWAVAEAL AFATLIVEGN HVRLSGQDVE RGTFSHQHAV LHDQETGAKY CPLDHVAMN

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.