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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45626 Canola mitochondrion 84.98 96.35
CDY08754 Canola mitochondrion 84.78 96.13
Bra024417.1-P Field mustard mitochondrion 94.05 95.07
AT3G55410.2 Thale cress mitochondrion 85.46 86.14
VIT_13s0019g00510.t01 Wine grape mitochondrion 77.46 84.83
PGSC0003DMT400060466 Potato mitochondrion 83.9 84.4
PGSC0003DMT400071319 Potato mitochondrion 83.71 84.12
Solyc04g011350.2.1 Tomato plastid 83.61 84.02
Solyc05g054640.2.1 Tomato nucleus, unclear 77.95 83.75
TraesCS2D01G283300.2 Wheat golgi 82.15 82.87
TraesCS2B01G301400.2 Wheat unclear 82.15 82.87
TraesCS2A01G284400.1 Wheat nucleus 82.15 82.87
Os04t0390000-02 Rice mitochondrion 81.95 82.68
EES10634 Sorghum mitochondrion 82.54 82.54
KRH01603 Soybean nucleus 82.44 82.44
EES10635 Sorghum mitochondrion 82.44 82.44
GSMUA_Achr5P28580_001 Banana mitochondrion 71.02 82.17
KRG90561 Soybean mitochondrion 81.66 81.98
Zm00001d025240_P002 Maize mitochondrion 81.85 81.85
KRH70503 Soybean nucleus 82.15 81.83
GSMUA_Achr10P... Banana mitochondrion 79.12 81.51
HORVU2Hr1G013170.1 Barley mitochondrion 77.95 81.03
Zm00001d003947_P005 Maize mitochondrion 82.63 80.98
GSMUA_Achr8P02070_001 Banana mitochondrion 76.2 80.43
Os07t0695800-01 Rice mitochondrion 77.66 78.97
Zm00001d036328_P001 Maize mitochondrion 77.95 78.64
TraesCS2A01G079500.1 Wheat golgi 77.95 78.56
TraesCS2D01G076900.1 Wheat unclear 77.95 78.49
HORVU2Hr1G070090.1 Barley mitochondrion 79.41 78.42
TraesCS2B01G094300.1 Wheat mitochondrion 77.85 78.31
Zm00001d047592_P005 Maize cytosol 12.2 69.83
KRH36194 Soybean cytosol, mitochondrion 11.71 67.42
Zm00001d023552_P001 Maize plastid 9.37 49.74
Zm00001d021330_P001 Maize cytosol 7.9 47.93
Protein Annotations
KEGG:00020+1.2.4.2KEGG:00310+1.2.4.2KEGG:00380+1.2.4.2Gene3D:1.10.287.1150InterPro:2-oxogl_dehyd_NMapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1Gene3D:3.40.50.11610Gene3D:3.40.50.12470Gene3D:3.40.50.970EntrezGene:836704ProteinID:AED98101.1
ArrayExpress:AT5G65750EnsemblPlantsGene:AT5G65750RefSeq:AT5G65750TAIR:AT5G65750RefSeq:AT5G65750-TAIR-GEnsemblPlants:AT5G65750.1
TAIR:AT5G65750.1EMBL:AY074374EMBL:AY096631Unigene:At.43ProteinID:BAB10682.1InterPro:DH_E1
GO:GO:0003674GO:GO:0003824GO:GO:0004591GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006091GO:GO:0006099GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009987GO:GO:0016491GO:GO:0016624GO:GO:0030976
GO:GO:0045252GO:GO:0046686GO:GO:0050897GO:GO:0055114InterPro:KGD_CRefSeq:NP_201376.1
PFAM:PF00676PFAM:PF02779PFAM:PF16078PFAM:PF16870PIRSF:PIRSF000157PO:PO:0000005
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007095PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR23152PANTHER:PTHR23152:SF4UniProt:Q9FLH2
SMART:SM00861SUPFAM:SSF52518InterPro:THDP-bindingTIGRFAMs:TIGR00239InterPro:Transketolase-like_Pyr-bdUniParc:UPI00000A29D2
Description
2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:Q9FLH2]
Coordinates
chr5:+:26303673..26308237
Molecular Weight (calculated)
116406.0 Da
IEP (calculated)
7.316
GRAVY (calculated)
-0.467
Length
1025 amino acids
Sequence
(BLAST)
0001: MVWFRIGSSV AKLAIRRTLS QSRCGSYATR TRVLPCQTRC FHSTILKSKA ESAAPVPRPV PLSKLTDSFL DGTSSVYLEE LQRAWEADPN SVDESWDNFF
0101: RNFVGQASTS PGISGQTIQE SMRLLLLVRA YQVNGHMKAK LDPLGLEKRE IPEDLTPGLY GFTEADLDRE FFLGVWRMSG FLSENRPVQT LRSILSRLEQ
0201: AYCGTIGYEY MHIADRDKCN WLRDKIETPT PRQYNSERRM VIYDRLTWST QFENFLATKW TTAKRFGLEG AESLIPGMKE MFDRSADLGV ENIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTRPVDE VGLYTGTGDV KYHLGTSYDR PTRGGKHLHL SLVANPSHLE AVDPVVIGKT RAKQYYTKDE NRTKNMGILI
0401: HGDGSFAGQG VVYETLHLSA LPNYCTGGTV HIVVNNQVAF TTDPREGRSS QYCTDVAKAL SAPIFHVNAD DIEAVVHACE LAAEWRQTFH SDVVVDLVCY
0501: RRFGHNEIDE PSFTQPKMYK VIRSHPSSLQ IYQEKLLQSG QVTQEDIDKI QKKVSSILNE EYEASKDYIP QKRDWLASHW TGFKSPEQIS RIRNTGVKPE
0601: ILKNVGKAIS TFPENFKPHR GVKRVYEQRA QMIESGEGID WGLGEALAFA TLVVEGNHVR LSGQDVERGT FSHRHSVLHD QETGEEYCPL DHLIKNQDPE
0701: MFTVSNSSLS EFGVLGFELG YSMENPNSLV IWEAQFGDFA NGAQVMFDQF ISSGEAKWLR QTGLVVLLPH GYDGQGPEHS SGRLERFLQM SDDNPYVIPE
0801: MDPTLRKQIQ ECNWQVVNVT TPANYFHVLR RQIHRDFRKP LIVMAPKNLL RHKQCVSNLS EFDDVKGHPG FDKQGTRFKR LIKDQSGHSD LEEGIRRLVL
0901: CSGKVYYELD EERKKSETKD VAICRVEQLC PFPYDLIQRE LKRYPNAEIV WCQEEPMNMG GYQYIALRLC TAMKALQRGN FNDIKYVGRL PSAATATGFY
1001: QLHVKEQTDL VKKALQPDPI TPVIP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.