Factsheet for Zm00001d021330_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047592_P005	Maize	cytosol	40.83	38.55
Zm00001d021889_P001	Maize	cytosol	10.06	32.69
Zm00001d036328_P001	Maize	mitochondrion	57.99	9.65
VIT_13s0019g00510.t01	Wine grape	mitochondrion	53.25	9.62
CDY62385	Canola	mitochondrion	50.3	9.45
CDY29088	Canola	cytosol, mitochondrion	49.7	9.34
CDY53693	Canola	mitochondrion	49.7	9.34
CDY13078	Canola	cytosol, mitochondrion	49.11	9.23
CDY08754	Canola	mitochondrion	49.11	9.18
CDY45626	Canola	mitochondrion	49.11	9.18
Solyc05g054640.2.1	Tomato	nucleus, unclear	50.89	9.01
KRH36194	Soybean	cytosol, mitochondrion	9.47	8.99
PGSC0003DMT400071319	Potato	mitochondrion	52.07	8.63
Solyc04g011350.2.1	Tomato	plastid	52.07	8.63
KRG90561	Soybean	mitochondrion	51.48	8.52
Zm00001d025240_P002	Maize	mitochondrion	51.48	8.49
PGSC0003DMT400060466	Potato	mitochondrion	50.89	8.44
Zm00001d003947_P005	Maize	mitochondrion	52.07	8.41
KRH70503	Soybean	nucleus	50.89	8.36
Bra003211.1-P	Field mustard	mitochondrion	49.7	8.27
AT3G55410.2	Thale cress	mitochondrion	49.7	8.26
Bra027582.1-P	Field mustard	mitochondrion	49.7	8.24
Bra024417.1-P	Field mustard	mitochondrion	49.11	8.19
KRH01603	Soybean	nucleus	49.11	8.1
AT5G65750.1	Thale cress	mitochondrion	47.93	7.9
Zm00001d023552_P001	Maize	plastid	7.1	6.22

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.12470	MapMan:35.2
UniProt:A0A1D6IA31	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591	GO:GO:0005488	GO:GO:0006091
GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0030976	GO:GO:0055114
ProteinID:ONM56853.1	PFAM:PF02779	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SUPFAM:SSF52518	InterPro:THDP-binding
InterPro:Transketolase-like_Pyr-bd	UniParc:UPI0008456AE7	EnsemblPlantsGene:Zm00001d021330	EnsemblPlants:Zm00001d021330_P001	EnsemblPlants:Zm00001d021330_T001	SEG:seg

Description

2-oxoglutarate dehydrogenase E1 component

Coordinates

chr7:+:149027267..149040791

Molecular Weight (calculated)

18077.6 Da

IEP (calculated)

7.196

GRAVY (calculated)

-0.143

Length

169 amino acids

Sequence
(BLAST)

001: MKKIFELHAA TIESGQGIDW AVAEALAFAT LIVEGNHVRL SGQDVERGTF SHRHAVLHDH ETGAKYCPLD HVAMNQNEEL FTVSNRIKTL AGASLLIFAN
101: KQDMQGALKP TGIAKIWLPL YCSLLEQSLS DSSSPPGSPA GTQGLRSTPQ TSTVAPPISS MASGARRCP

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.