Factsheet for Bra003211.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53693	Canola	mitochondrion	88.29	99.78
Bra027582.1-P	Field mustard	mitochondrion	97.15	96.86
AT3G55410.2	Thale cress	mitochondrion	96.46	96.36
VIT_13s0019g00510.t01	Wine grape	mitochondrion	78.44	85.15
Bra024417.1-P	Field mustard	mitochondrion	84.55	84.71
Solyc04g011350.2.1	Tomato	plastid	84.35	84.02
PGSC0003DMT400071319	Potato	mitochondrion	84.25	83.92
PGSC0003DMT400060466	Potato	mitochondrion	83.46	83.22
Solyc05g054640.2.1	Tomato	nucleus, unclear	77.56	82.6
TraesCS2D01G283300.2	Wheat	golgi	82.48	82.48
TraesCS2B01G301400.2	Wheat	unclear	82.48	82.48
TraesCS2A01G284400.1	Wheat	nucleus	82.48	82.48
Os04t0390000-02	Rice	mitochondrion	82.19	82.19
KRH01603	Soybean	nucleus	82.68	81.95
KRG90561	Soybean	mitochondrion	82.28	81.88
HORVU2Hr1G013170.1	Barley	mitochondrion	79.43	81.85
GSMUA_Achr5P28580_001	Banana	mitochondrion	71.26	81.72
GSMUA_Achr10P...	Banana	mitochondrion	79.82	81.51
KRH70503	Soybean	nucleus	82.48	81.44
Zm00001d025240_P002	Maize	mitochondrion	82.09	81.37
EES10635	Sorghum	mitochondrion	81.99	81.27
EES10634	Sorghum	mitochondrion	81.89	81.17
GSMUA_Achr8P02070_001	Banana	mitochondrion	76.87	80.43
Zm00001d003947_P005	Maize	mitochondrion	81.99	79.64
Os07t0695800-01	Rice	mitochondrion	78.54	79.17
TraesCS2A01G079500.1	Wheat	golgi	79.23	79.15
TraesCS2D01G076900.1	Wheat	unclear	79.23	79.08
Zm00001d036328_P001	Maize	mitochondrion	78.74	78.74
TraesCS2B01G094300.1	Wheat	mitochondrion	78.94	78.7
HORVU2Hr1G070090.1	Barley	mitochondrion	80.12	78.42
Zm00001d047592_P005	Maize	cytosol	12.99	73.74
KRH36194	Soybean	cytosol, mitochondrion	11.71	66.85
Zm00001d023552_P001	Maize	plastid	9.84	51.81
Zm00001d021330_P001	Maize	cytosol	8.27	49.7

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EnsemblPlantsGene:Bra003211	EnsemblPlants:Bra003211.1
EnsemblPlants:Bra003211.1-P	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591	GO:GO:0005488
GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016624
GO:GO:0030976	GO:GO:0055114	InterPro:KGD_C	UniProt:M4CG78	PFAM:PF00676	PFAM:PF02779
PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SMART:SM00861
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI00025414B0	:

Description

AT3G55410 (E=0.0) | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative

Coordinates

chrA07:+:11901819..11905350

Molecular Weight (calculated)

115046.0 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.447

Length

1016 amino acids

Sequence
(BLAST)

0001: MVWFRAGSSA TKLAVRRILN QGTRTPRYLP SQNRSFHSTL YRPNPQSSAA PVPRAVPLSK LTDSFLDGTS SVYLEELQRA WEADPTSVDE SWDNFFRNFV
0101: GQAATSPGIS GQTIQESMRL LLLVRAYQVN GHMKAKLDPL GLEQREIPED LDLALYGFTE ADLDREFFLG VWQMSGFMSE NRPVQTLRSI LTRLQQAYCG
0201: SIGFEYMHIA DRDKCNWLRE KIETPTPWRY NRERREVILD RLAWSTQFEN FLATKWTTAK RFGLEGGESL IPGMKEMFDR AADLGVESIV IGMSHRGRLN
0301: VLGNVVRKPL RQIFSEFSGG IRPVDEVGYT GTGDVKYHLG TSYDRPTRGG KKIHLSLVAN PSHLEAADSV VVGKTRAKQY YSKDLDRTKN LGILIHGDGS
0401: FAGQGVVYET LHLSALPNYT TGGTIHIVVN NQVAFTTDPR AGRSSQYCTD VAKALSAPIF HVNGDDVEAV VHACELAAEW RQTFHSDVVV DLVCYRRFGH
0501: NEIDEPSFTQ PKMYKVIKNH PSTLQIYHKK LLECGEISQQ DIDRIQEKVN TILNEEFVAS KDYLSKKRDW LSTNWAGFKS PEQISRVRNT GVKPEILKTV
0601: GKAISSLPEN FKPHRAVKKV YEQRAQMIET GEGIDWALAE ALAFATLVVE GNHVRLSGQD VERGTFSHRH SVLHDQETGE EYCPLDHLVM NQDPEMFTVS
0701: NSSLSEFGVL GFELGYSMES PNSLVLWEAQ FGDFANGAQV IFDQFISSGE AKWLRQTGLV VLLPHGYDGQ GPEHSSARLE RYLQMSDDNP YVIPDMEPTL
0801: RKQIQECNWQ IVNATTPANY FHVLRRQLHR DFRKPLIVMA PKNLLRHKDC KSNLSEFDDV QGHPGFDKQG TRFKRLIKDQ NDHSDLEEGI RRLVLCSGKV
0901: YYELDDERKK VGASDVAICR VEQLCPFPYD LIQRELKRYP NAEIVWCQEE AMNMGAYSYI TPRLWTAMRS LGSGDMEDIK YVGRGPSAAT ATGFYTFHVK
1001: EQAELVQKAI GKESIS

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.