Factsheet for GSMUA_Achr5P28580_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P02070_001	Banana	mitochondrion	84.88	77.45
GSMUA_Achr10P...	Banana	mitochondrion	83.86	74.67
CDY53693	Canola	mitochondrion	75.06	73.97
CDY62385	Canola	mitochondrion	75.06	73.97
CDY13078	Canola	cytosol, mitochondrion	74.61	73.53
CDY29088	Canola	cytosol, mitochondrion	74.61	73.53
CDY45626	Canola	mitochondrion	74.94	73.45
CDY08754	Canola	mitochondrion	74.72	73.23
HORVU2Hr1G013170.1	Barley	mitochondrion	81.15	72.92
VIT_13s0019g00510.t01	Wine grape	mitochondrion	76.98	72.86
Solyc05g054640.2.1	Tomato	nucleus, unclear	78.1	72.54
Solyc04g011350.2.1	Tomato	plastid	83.07	72.16
PGSC0003DMT400071319	Potato	mitochondrion	82.73	71.86
AT3G55410.2	Thale cress	mitochondrion	81.83	71.29
Bra003211.1-P	Field mustard	mitochondrion	81.72	71.26
KRH01603	Soybean	nucleus	82.28	71.12
AT5G65750.1	Thale cress	mitochondrion	82.17	71.02
KRG90561	Soybean	mitochondrion	81.83	71.01
PGSC0003DMT400060466	Potato	mitochondrion	81.6	70.95
Bra024417.1-P	Field mustard	mitochondrion	81.15	70.91
TraesCS2D01G076900.1	Wheat	unclear	81.38	70.83
TraesCS2A01G079500.1	Wheat	golgi	81.26	70.8
Os07t0695800-01	Rice	mitochondrion	80.47	70.73
TraesCS2B01G094300.1	Wheat	mitochondrion	81.26	70.66
Bra027582.1-P	Field mustard	mitochondrion	80.93	70.36
KRH36194	Soybean	cytosol, mitochondrion	14.11	70.22
Zm00001d036328_P001	Maize	mitochondrion	80.47	70.18
KRH70503	Soybean	nucleus	81.49	70.17

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004591	GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016624	GO:GO:0030976	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G28580_001
EnsemblPlants:GSMUA_Achr5P28580_001	EnsemblPlants:GSMUA_Achr5T28580_001	InterPro:KGD_C	UniProt:M0T2I2	PFAM:PF00676	PFAM:PF02779
PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SMART:SM00861
SUPFAM:SSF52518	InterPro:THDP-binding	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI0002948BEE	:	:

Description

Putative 2-oxoglutarate dehydrogenase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G28580_001]

Coordinates

chr5:-:28695257..28701037

Molecular Weight (calculated)

101082.0 Da

IEP (calculated)

6.819

GRAVY (calculated)

-0.530

Length

886 amino acids

Sequence
(BLAST)

001: MAWFRAVSGV ARLAIRRNLS QAPHHIGRPR ALPSPPSRGF HSAALRRKAE SAAPIPRAVP LSRLTDSFLD GTSSVYLEEL QRAWEADPNS VDEAYQVNGH
101: MKAKLDPLGL EEREIPEDLD LGLYGFTEAD LDRELEQAYC GNVGYEYMHI PDRDKCNWIR DKIETVKPRE YSRERRETLI PGMKEMFDRA ADQGVESIVI
201: GMSHRGRLNV LGNVVRKPLR QIFSEFSSGT KPVDGEVGLY TGTGDVKYHL GTSYDRPTRG GKRIHLSLVA NPSHLEAVDP LVVGKTRAKQ YYSNDIDRIK
301: NMGVLIHGDG SFAGQGVVYE TLHLSALPNY TTGGTIHIVI NNQWRQTFHS DVVVDIVCYR RFGHNEIDEP SFTQPKMYQV IRNHPSALEI YQSKLLESGE
401: ITKEDIERIH NKVTSILNEE FINSKDYVPK RRDWLSAYWL GFKSPEQISR IRNTGVKPEI LKRVGQAITT LPETFKPHRA VKKIFEQRAQ MIESGEGIDW
501: AMGEALAFAT LIIEGNHVRL SGQDVERGTF SHRHSVIHDQ QTGEKYCPLD HIVMNQDEEL FTVSNSSLSE FAVLGFELGY SMENPNSLIL WEAQFGDFSN
601: GAQVMFDQFL SSGESKWLRQ TGLVVLLPHG YDGQGPEHSS ARLERFLQMS DDNPYVIPEM DPTLRKQIQE CNWQVVNVTT PANYFHVLRR QIHREFRKPL
701: IVMSPKNLLR HKDCKSNLSE FDDLEGHPGF DKQGTRFKRL IKDQNNHKEI EEGINRLILC SGKASHVYYE LDEGRKKLDR QDVAICRVEQ LCPFPYDLIQ
801: RELKRYPNAE IVWCQEEPMN MGAYSYINPR LYTAMRALGR GEFEDIKYVG RAPSAATATG FYSVHVQEQT ELVQKALQPE AISFPY

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.