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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G079500.1 Wheat golgi 98.92 99.02
TraesCS2B01G094300.1 Wheat mitochondrion 98.62 98.53
HORVU2Hr1G013170.1 Barley mitochondrion 95.19 98.28
Os07t0695800-01 Rice mitochondrion 91.45 92.36
Zm00001d036328_P001 Maize mitochondrion 91.26 91.44
CDY53693 Canola mitochondrion 74.36 84.2
CDY62385 Canola mitochondrion 74.26 84.09
CDY13078 Canola cytosol, mitochondrion 74.07 83.87
CDY29088 Canola cytosol, mitochondrion 74.07 83.87
CDY45626 Canola mitochondrion 73.67 82.96
CDY08754 Canola mitochondrion 73.67 82.96
GSMUA_Achr5P28580_001 Banana mitochondrion 70.83 81.38
TraesCS2D01G283300.2 Wheat golgi 80.65 80.81
Solyc04g011350.2.1 Tomato plastid 79.76 79.61
Bra003211.1-P Field mustard mitochondrion 79.08 79.23
PGSC0003DMT400071319 Potato mitochondrion 79.37 79.22
AT3G55410.2 Thale cress mitochondrion 78.88 78.96
GSMUA_Achr8P02070_001 Banana mitochondrion 75.25 78.89
Bra024417.1-P Field mustard mitochondrion 78.49 78.8
VIT_13s0019g00510.t01 Wine grape mitochondrion 72.2 78.53
Bra027582.1-P Field mustard mitochondrion 78.19 78.12
PGSC0003DMT400060466 Potato mitochondrion 78.09 78.02
Solyc05g054640.2.1 Tomato nucleus, unclear 73.08 77.99
AT5G65750.1 Thale cress mitochondrion 78.49 77.95
KRG90561 Soybean mitochondrion 76.92 76.69
KRH01603 Soybean nucleus 76.33 75.8
KRH70503 Soybean nucleus 76.13 75.32
KRH36194 Soybean cytosol, mitochondrion 11.89 67.98
Protein Annotations
KEGG:00020+1.2.4.2KEGG:00310+1.2.4.2KEGG:00380+1.2.4.2Gene3D:1.10.287.1150InterPro:2-oxogl_dehyd_NMapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1Gene3D:3.40.50.11610Gene3D:3.40.50.12470Gene3D:3.40.50.970InterPro:DH_E1GO:GO:0003674
GO:GO:0003824GO:GO:0004591GO:GO:0005488GO:GO:0006091GO:GO:0006099GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016624GO:GO:0030976GO:GO:0055114InterPro:KGD_C
PFAM:PF00676PFAM:PF02779PFAM:PF16078PFAM:PF16870PIRSF:PIRSF000157PANTHER:PTHR23152
PANTHER:PTHR23152:SF4SMART:SM00861SUPFAM:SSF52518InterPro:THDP-bindingTIGRFAMs:TIGR00239EnsemblPlantsGene:TraesCS2D01G076900
EnsemblPlants:TraesCS2D01G076900.1InterPro:Transketolase-like_Pyr-bdTIGR:cd02016SEG:seg::
Description
No Description!
Coordinates
chr2D:+:32798767..32803549
Molecular Weight (calculated)
114808.0 Da
IEP (calculated)
6.861
GRAVY (calculated)
-0.411
Length
1018 amino acids
Sequence
(BLAST)
0001: MTWLRAATGV ARHAARRAVL ARATSATPGA RSAGFHTTAL RRRAAAPAPR AVPLSRLTDS FLDGTSSVYL EELQRAWEAD PSSVDESWDN FFRNFLGQAA
0101: GSPATGLSGQ TIQESMQLLL LVRAYQVNGH MKAALDPLGL DDRAVPEDLD LALYGFTEAD LDREFFLGVW MMAGFLSENR PVLTLREILG KLERAYCGPI
0201: GFEYMHIPDR DKCNWLREKI ETVAPREYPK DRRLVMLDRL IWSTQFENFL ATKWATAKRF GLEGGETLIP GMKEMFDRSA DLGVENIVIG MPHRGRLNVL
0301: GNVVRKPLSQ IFSEFAGGTR PVEGEDGLYT GTGDVKYHLG TSYDRPTRGG KRIHLSLVAN PSHLEAVDPV VIGKTRAKQF YSNDDDRTKN MGILIHGDGS
0401: FAGQGVVYET LHLSALPNYT TGGTIHIVVN NQVAFTTDPR AGRSSQYCTD VAKAVNVPIF HVNGDDLEAV VRVCELAAEW RQTFHSDVVV DLICYRRFGH
0501: NEIDEPSFTQ PKMYQVIKNH PSSLKLYEQK LLETGEVTKE DVQRIHDKVN RILNEEFAKS KDYVPNKRDW LSAYWTGFKS PEQISRVRNT GVKPEVLKRV
0601: GQAITTLPES FKPHRAVKKI FEQRAAMIES GEGIDWAVAE ALAFAALIVE GNHVRLSGQD VERGTFSHRH SVVHDQETGA KYCPLDHVVM NQNEELFTVS
0701: NSSLSEFAVL GFELGYSMEN PNSLVLWEAQ FGDFSNGAQV MFDQFLSSGE AKWLRQTGLV VLLPHGYDGQ GPEHSSSRLE RFLQMSDDNP FVIPEMDPTL
0801: RKQIQECNWQ VVNVTTPANY FHVLRRQIHR DFRKPLIVTA PKNLLRHKEC KSNLSEFDDV EGHPGFDKQG TRFKRLIKDR NDHKEVEEGI NRLVLCSGKV
0901: YYELDDERKK SERSDVAICR VEQLSPFPYD LIQRELKRYP NAEIVWCQEE PMNMGAYSYI SPRLYSAMKT LGRGTFEDIK YVGRAPSAAT ATGFLTVHVQ
1001: EQSELVKKAL QPEPIKFP
Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)
0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN
Arabidopsis Description
2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.