Factsheet for Bra027582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13078	Canola	cytosol, mitochondrion	87.54	99.22
Bra003211.1-P	Field mustard	mitochondrion	96.86	97.15
AT3G55410.2	Thale cress	mitochondrion	96.07	96.26
VIT_13s0019g00510.t01	Wine grape	mitochondrion	77.53	84.4
Bra024417.1-P	Field mustard	mitochondrion	83.12	83.53
Solyc04g011350.2.1	Tomato	plastid	83.61	83.53
PGSC0003DMT400071319	Potato	mitochondrion	83.61	83.53
PGSC0003DMT400060466	Potato	mitochondrion	82.73	82.73
Solyc05g054640.2.1	Tomato	nucleus, unclear	76.94	82.18
TraesCS2D01G283300.2	Wheat	golgi	81.16	81.4
TraesCS2B01G301400.2	Wheat	unclear	81.16	81.4
TraesCS2A01G284400.1	Wheat	nucleus	81.16	81.4
HORVU2Hr1G013170.1	Barley	mitochondrion	78.51	81.14
Os04t0390000-02	Rice	mitochondrion	80.77	81.0
KRH01603	Soybean	nucleus	81.45	80.98
GSMUA_Achr5P28580_001	Banana	mitochondrion	70.36	80.93
KRG90561	Soybean	mitochondrion	80.86	80.71
GSMUA_Achr10P...	Banana	mitochondrion	78.61	80.5
Zm00001d025240_P002	Maize	mitochondrion	80.86	80.39
KRH70503	Soybean	nucleus	81.16	80.37
EES10635	Sorghum	mitochondrion	80.77	80.29
EES10634	Sorghum	mitochondrion	80.67	80.2
GSMUA_Achr8P02070_001	Banana	mitochondrion	76.06	79.81
Zm00001d003947_P005	Maize	mitochondrion	80.77	78.68
Os07t0695800-01	Rice	mitochondrion	77.63	78.47
TraesCS2A01G079500.1	Wheat	golgi	78.12	78.27
TraesCS2D01G076900.1	Wheat	unclear	78.12	78.19
TraesCS2B01G094300.1	Wheat	mitochondrion	78.02	78.02
Zm00001d036328_P001	Maize	mitochondrion	77.72	77.95
HORVU2Hr1G070090.1	Barley	mitochondrion	79.1	77.65
Zm00001d047592_P005	Maize	cytosol	12.76	72.63
KRH36194	Soybean	cytosol, mitochondrion	11.58	66.29
Zm00001d023552_P001	Maize	plastid	9.81	51.81
Zm00001d021330_P001	Maize	cytosol	8.24	49.7

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EnsemblPlantsGene:Bra027582	EnsemblPlants:Bra027582.1
EnsemblPlants:Bra027582.1-P	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591	GO:GO:0005488
GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016624
GO:GO:0030976	GO:GO:0055114	InterPro:KGD_C	UniProt:M4EFM0	PFAM:PF00676	PFAM:PF02779
PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SMART:SM00861
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI00025426EA	SEG:seg

Description

AT3G55410 (E=0.0) | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative

Coordinates

chrA09:+:13165868..13169800

Molecular Weight (calculated)

115312.0 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.446

Length

1019 amino acids

Sequence
(BLAST)

0001: MVWFRAGSNV TKLAVRRILN QGTSYATRTR SLPSQTRSFH SSLHRPNPQS TTAPIPRAVP LSKLTDSFLD GTSSVYLEEL QRAWESDPTS VDESWDNFFR
0101: NFVGQAATSP GISGQTIQES MNLLLLVRAY QVNGHMKANL DPLGLEQREI PEDLDLALYG FTEADLDREF FLGVWQMSGF MSENRPVQTL RSILARLQQA
0201: YCGSIGFEYM HIADRDKCNW LREKIETPTP WRYNRERREV ILDRLAWSTQ FENFLATKWT TAKRFGLEGG ESLIPGMKEM FDRAADLGVE SIVIGMSHRG
0301: RLNFLGNVVR KPLRQIFSEF SGGIRPVDEV GYTGTGDVKY HLGTSYDRPT RGGKKIHLSL VANPSHLEAA DSVVVGKTRA KQYYSKDMDR TKNLGILIHG
0401: DGSFAGQGVV YETLHLSALP SYTTGGTIHI VVNNQVAFTT DPRAGRSSQY CTDVAKALSA PIFHVNGDDV EAVVHACELA AEWRQTFHSD VVVDLVCYRR
0501: FGHNEIDEPS FTQPKMYKVI KNHPSTLQIY HKKLLECGEI SQQDIDRIQE KVNTILSEEF VASKDYLSKK RDWLSTNWAG FKSPEQISRV RNTGVKPEIL
0601: KTVGKAISSL PENFKPHRAV KKVYEQRAQM IETGEGIDWA LAEALALATL VVEGNHVRLS GQDVERGTFS HRHSVLHDQE TGEEYCPLDH LVMNQDPEMF
0701: TVSNSSLSEF GVLGFELGYS MESPNSLVLW EAQFGDFANG AQVIFDQFIS SGEAKWLRQT GLVVLLPHGY DGQGPEHSSA RLERYLQMSD DNPYVIPDME
0801: PTMRKQIQEC NWQIVNATTP ANYFHVLRRQ IHRDFRKPLI VMAPKNLLRH KDCKSNLSEF DDVQGHPGFD KQGTRFKRLI KDQNDHSDLE EGIRRLVLCS
0901: GKVYYELDDE RKKVGASDVA ICRVEQLCPF PYDLIQRELK RYPNAEIVWC QEEAMNMGAF SYITPRLWTA MRSLGRGDME DIKSFGRGPS AAPATGFYTF
1001: HVKEQAELVQ KAIGKEPIS

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.