Factsheet for Os04t0390000-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10635	Sorghum	mitochondrion	95.37	94.54
TraesCS2B01G301400.2	Wheat	unclear	94.49	94.49
EES10634	Sorghum	mitochondrion	95.18	94.34
TraesCS2A01G284400.1	Wheat	nucleus	94.29	94.29
TraesCS2D01G283300.2	Wheat	golgi	94.29	94.29
Zm00001d025240_P002	Maize	mitochondrion	95.08	94.24
Zm00001d003947_P005	Maize	mitochondrion	95.08	92.35
HORVU2Hr1G070090.1	Barley	mitochondrion	89.27	87.38
GSMUA_Achr10P...	Banana	mitochondrion	83.37	85.13
CDY45626	Canola	mitochondrion	75.3	84.62
CDY08754	Canola	mitochondrion	75.2	84.51
CDY53693	Canola	mitochondrion	74.21	83.87
CDY62385	Canola	mitochondrion	74.21	83.87
VIT_13s0019g00510.t01	Wine grape	mitochondrion	77.17	83.76
PGSC0003DMT400071319	Potato	mitochondrion	83.86	83.53
Solyc04g011350.2.1	Tomato	plastid	83.76	83.43
CDY29088	Canola	cytosol, mitochondrion	73.72	83.31
CDY13078	Canola	cytosol, mitochondrion	73.62	83.2
Bra024417.1-P	Field mustard	mitochondrion	82.97	83.14
Solyc05g054640.2.1	Tomato	nucleus, unclear	77.56	82.6
PGSC0003DMT400060466	Potato	mitochondrion	82.68	82.43
Bra003211.1-P	Field mustard	mitochondrion	82.19	82.19
AT5G65750.1	Thale cress	mitochondrion	82.68	81.95
AT3G55410.2	Thale cress	mitochondrion	81.89	81.81
KRG90561	Soybean	mitochondrion	81.69	81.29
Os07t0695800-01	Rice	mitochondrion	80.51	81.15
Bra027582.1-P	Field mustard	mitochondrion	81.0	80.77
KRH01603	Soybean	nucleus	81.3	80.59
KRH70503	Soybean	nucleus	80.81	79.79
KRH36194	Soybean	cytosol, mitochondrion	12.2	69.66
Zm00001d023552_P001	Maize	plastid	10.33	54.4

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EntrezGene:4335673	UniProt:A0A0P0W9W2
ProteinID:BAS88954.1	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591	GO:GO:0005488
GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016624
GO:GO:0030976	GO:GO:0055114	InterPro:KGD_C	EnsemblPlantsGene:Os04g0390000	EnsemblPlants:Os04t0390000-02	PFAM:PF00676
PFAM:PF02779	PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4
SMART:SM00861	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI0000DD904F
RefSeq:XP_015635806.1	SEG:seg	:	:	:	:

Description

Similar to OSIGBa0096P03.7 protein. (Os04t0390000-01);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-02);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-03);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-04)

Coordinates

chr4:+:19175766..19182525

Molecular Weight (calculated)

115612.0 Da

IEP (calculated)

6.904

GRAVY (calculated)

-0.468

Length

1016 amino acids

Sequence
(BLAST)

0001: MGWFRAASGL ARVALRRNLA RAPANPFAGP APRYFHSTRP RRFAAPVPRA VPLSRLTDSF LDGTSSVYLE ELQRAWEADP TSVDESWDNF FRNFVGQAAT
0101: SPGISGQTIQ ESMRLLLLVR AYQVSGHLKA KLDPLALEER PIPDVLDPAF YGFSEADLDR EFFLGVWRMA GFLSENRPVQ TLRSVLERLE QAYCGTIGYE
0201: YMHIPDREKC NWLRDRIETV NAREYSYDRR QVMLDRLMWS TQFESFLAQK WTTAKRFGLE GAETLIPGMK EMFDRAADLG VESIVIGMPH RGRLNVLGNV
0301: VRKPLRQIFS EFSGGTKPAE EGEGLYTGTG DVKYHLGTSY DRPTRGGKHI HLSLVANPSH LEAVDPVVAG KTRAKQYYSN DLDRTKNLGV LLHGDGSFSG
0401: QGVVYETLHL SALPNYTTGG TIHIVVNNQV AFTTDPRAGR SSQYCTDVAK ALDAPIFHVN GDDLEAVVHV CELAAEWRQT FHSDVVVDIV CYRRFGHNEI
0501: DEPSFTQPKM YKIIRNHQSA LEIYQNRLLE SGKISKEDID KMQKKVSTIL NDEFQNSKEY IPNKRDWLSA YWTGFKSPEQ ISRIRNTGVK PEILKRVGEA
0601: MTTLPENFKP HRAVKKIFEL RRQMIETGEG IDWAVGEALA FATLIIEGNH VRLSGQDVER GTFSHRHAVI HDQETGEQYC PLDNLVMNQD EELFTVSNSS
0701: LSEFAVLGFE LGYSMENPNS LVLWEAQFGD FSNGAQVIFD QFLSSGEAKW LRQTGLVVCL PHGYDGQGPE HSSARLERFL QMSDDNPYVI PEMDPTLRKQ
0801: IQQCNWQVVN VTTPANYFHV LRRQIHRDFR KPLIVMSPKN LLRHKDCKSN LSEFDDLAGH PGFDKQGTRF KRLIKDQNNH KDLEEGIKRL VLCSGKVYYE
0901: LDEERRKKER DDVAICRVEQ LCPFPYDLIQ RELKRYPNAE IVWCQEEPMN MGAYSYINPR LLTAMRALGR GTIDDIKYVG RAPSAATATG FYSVHVQEQT
1001: ELVQKALQRD PINSPF

Best Arabidopsis Sequence Match ( AT5G65750.1 )
(BLAST)

0001: MVWFRIGSSV AKLAIRRTLS QSRCGSYATR TRVLPCQTRC FHSTILKSKA ESAAPVPRPV PLSKLTDSFL DGTSSVYLEE LQRAWEADPN SVDESWDNFF
0101: RNFVGQASTS PGISGQTIQE SMRLLLLVRA YQVNGHMKAK LDPLGLEKRE IPEDLTPGLY GFTEADLDRE FFLGVWRMSG FLSENRPVQT LRSILSRLEQ
0201: AYCGTIGYEY MHIADRDKCN WLRDKIETPT PRQYNSERRM VIYDRLTWST QFENFLATKW TTAKRFGLEG AESLIPGMKE MFDRSADLGV ENIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTRPVDE VGLYTGTGDV KYHLGTSYDR PTRGGKHLHL SLVANPSHLE AVDPVVIGKT RAKQYYTKDE NRTKNMGILI
0401: HGDGSFAGQG VVYETLHLSA LPNYCTGGTV HIVVNNQVAF TTDPREGRSS QYCTDVAKAL SAPIFHVNAD DIEAVVHACE LAAEWRQTFH SDVVVDLVCY
0501: RRFGHNEIDE PSFTQPKMYK VIRSHPSSLQ IYQEKLLQSG QVTQEDIDKI QKKVSSILNE EYEASKDYIP QKRDWLASHW TGFKSPEQIS RIRNTGVKPE
0601: ILKNVGKAIS TFPENFKPHR GVKRVYEQRA QMIESGEGID WGLGEALAFA TLVVEGNHVR LSGQDVERGT FSHRHSVLHD QETGEEYCPL DHLIKNQDPE
0701: MFTVSNSSLS EFGVLGFELG YSMENPNSLV IWEAQFGDFA NGAQVMFDQF ISSGEAKWLR QTGLVVLLPH GYDGQGPEHS SGRLERFLQM SDDNPYVIPE
0801: MDPTLRKQIQ ECNWQVVNVT TPANYFHVLR RQIHRDFRKP LIVMAPKNLL RHKQCVSNLS EFDDVKGHPG FDKQGTRFKR LIKDQSGHSD LEEGIRRLVL
0901: CSGKVYYELD EERKKSETKD VAICRVEQLC PFPYDLIQRE LKRYPNAEIV WCQEEPMNMG GYQYIALRLC TAMKALQRGN FNDIKYVGRL PSAATATGFY
1001: QLHVKEQTDL VKKALQPDPI TPVIP

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:Q9FLH2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.