Factsheet for Zm00001d023552_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36194	Soybean	cytosol, mitochondrion	18.65	20.22
CDY13078	Canola	cytosol, mitochondrion	50.78	10.9
CDY29088	Canola	cytosol, mitochondrion	50.78	10.9
CDY53693	Canola	mitochondrion	50.78	10.9
CDY62385	Canola	mitochondrion	50.78	10.9
Zm00001d025240_P002	Maize	mitochondrion	55.44	10.44
CDY45626	Canola	mitochondrion	48.7	10.4
Os04t0390000-02	Rice	mitochondrion	54.4	10.33
Zm00001d003947_P005	Maize	mitochondrion	55.96	10.32
CDY08754	Canola	mitochondrion	48.19	10.29
Solyc05g054640.2.1	Tomato	nucleus, unclear	49.22	9.96
AT3G55410.2	Thale cress	mitochondrion	52.33	9.93
TraesCS2D01G283300.2	Wheat	golgi	51.81	9.84
TraesCS2B01G301400.2	Wheat	unclear	51.81	9.84
TraesCS2A01G284400.1	Wheat	nucleus	51.81	9.84
Bra003211.1-P	Field mustard	mitochondrion	51.81	9.84
Bra027582.1-P	Field mustard	mitochondrion	51.81	9.81
GSMUA_Achr10P...	Banana	mitochondrion	49.74	9.65
HORVU2Hr1G070090.1	Barley	mitochondrion	51.81	9.63
VIT_13s0019g00510.t01	Wine grape	mitochondrion	46.63	9.62
Zm00001d036328_P001	Maize	mitochondrion	50.26	9.55
PGSC0003DMT400071319	Potato	mitochondrion	50.26	9.51
Solyc04g011350.2.1	Tomato	plastid	49.74	9.41
Bra024417.1-P	Field mustard	mitochondrion	49.22	9.37
AT5G65750.1	Thale cress	mitochondrion	49.74	9.37
PGSC0003DMT400060466	Potato	mitochondrion	49.22	9.32
KRG90561	Soybean	mitochondrion	48.7	9.21
KRH01603	Soybean	nucleus	48.7	9.17
KRH70503	Soybean	nucleus	48.7	9.14
Zm00001d021330_P001	Maize	cytosol	6.22	7.1
Zm00001d021889_P001	Maize	cytosol	0.52	1.92
Zm00001d047592_P005	Maize	cytosol	1.04	1.12

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	MapMan:35.2
UniProt:A0A1D6IU32	ProteinID:AQK39554.1	InterPro:Alpha/beta_knot_MTases	GO:GO:0003674	GO:GO:0003824	GO:GO:0004591
GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0030976	GO:GO:0032259
GO:GO:0055114	InterPro:KGD_C	PFAM:PF04452	PFAM:PF16870	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4
SUPFAM:SSF75217	UniParc:UPI00084467FC	EnsemblPlantsGene:Zm00001d023552	EnsemblPlants:Zm00001d023552_P001	EnsemblPlants:Zm00001d023552_T001	InterPro:rRNA_ssu_MeTrfase-E
SEG:seg	:	:	:	:	:

Description

2-oxoglutarate dehydrogenase E1 component

Coordinates

chr10:-:9848878..9850126

Molecular Weight (calculated)

21709.8 Da

IEP (calculated)

9.039

GRAVY (calculated)

-0.686

Length

193 amino acids

Sequence
(BLAST)

001: PPPLSLPSLF SLPSPLSSVP SPRSSLSRPS SSSRPRLQRP RLSSAPRRTD AGHPARPAEP QPRAPSKSSL SEFDDLVGHP GFDKQGTRFK RLIKDQNNHK
101: DLEEGINRLV LCSGKFQVYY ELDEERRKTE RTDVAICRVE QLCPFPYDLI QWTLKGGRAD WLIEKCIELG ASSVTPVLTE QCHTIAENRV DRL

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.