Factsheet for AT3G55410.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62385	Canola	mitochondrion	86.53	97.89
CDY53693	Canola	mitochondrion	86.43	97.78
CDY29088	Canola	cytosol, mitochondrion	86.23	97.55
CDY13078	Canola	cytosol, mitochondrion	86.14	97.44
Bra003211.1-P	Field mustard	mitochondrion	96.36	96.46
Bra027582.1-P	Field mustard	mitochondrion	96.26	96.07
VIT_13s0019g00510.t01	Wine grape	mitochondrion	79.45	86.32
AT5G65750.1	Thale cress	mitochondrion	86.14	85.46
PGSC0003DMT400071319	Potato	mitochondrion	85.45	85.2
Solyc04g011350.2.1	Tomato	plastid	85.25	85.0
PGSC0003DMT400060466	Potato	mitochondrion	84.46	84.3
Solyc05g054640.2.1	Tomato	nucleus, unclear	78.47	83.65
KRH01603	Soybean	nucleus	82.89	82.24
TraesCS2D01G283300.2	Wheat	golgi	81.91	81.99
TraesCS2B01G301400.2	Wheat	unclear	81.91	81.99
TraesCS2A01G284400.1	Wheat	nucleus	81.91	81.99
Os04t0390000-02	Rice	mitochondrion	81.81	81.89
HORVU2Hr1G013170.1	Barley	mitochondrion	79.35	81.85
GSMUA_Achr5P28580_001	Banana	mitochondrion	71.29	81.83
KRG90561	Soybean	mitochondrion	82.1	81.78
KRH70503	Soybean	nucleus	82.69	81.73
GSMUA_Achr10P...	Banana	mitochondrion	79.74	81.51
EES10635	Sorghum	mitochondrion	82.01	81.37
Zm00001d025240_P002	Maize	mitochondrion	82.01	81.37
EES10634	Sorghum	mitochondrion	81.91	81.27
GSMUA_Achr8P02070_001	Banana	mitochondrion	76.99	80.64
Zm00001d003947_P005	Maize	mitochondrion	82.01	79.73
Os07t0695800-01	Rice	mitochondrion	78.47	79.17
TraesCS2A01G079500.1	Wheat	golgi	78.96	78.96
TraesCS2D01G076900.1	Wheat	unclear	78.96	78.88
Zm00001d036328_P001	Maize	mitochondrion	78.66	78.74
TraesCS2B01G094300.1	Wheat	mitochondrion	78.86	78.7
HORVU2Hr1G070090.1	Barley	mitochondrion	79.74	78.13
Zm00001d047592_P005	Maize	cytosol	13.18	74.86
KRH36194	Soybean	cytosol, mitochondrion	11.8	67.42
Zm00001d023552_P001	Maize	plastid	9.93	52.33
Zm00001d021330_P001	Maize	cytosol	8.26	49.7

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	EntrezGene:824707	UniProt:A0A178VFK1
ProteinID:AEE79381.1	ProteinID:ANM65517.1	ArrayExpress:AT3G55410	EnsemblPlantsGene:AT3G55410	RefSeq:AT3G55410	TAIR:AT3G55410
RefSeq:AT3G55410-TAIR-G	EnsemblPlants:AT3G55410.2	Unigene:At.24093	InterPro:DH_E1	UniProt:F4IWV2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004591	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009987	GO:GO:0016624	GO:GO:0030976	GO:GO:0045252	GO:GO:0050897
GO:GO:0055114	InterPro:KGD_C	RefSeq:NP_001327477.1	RefSeq:NP_191101.2	ProteinID:OAP04165.1	PFAM:PF00676
PFAM:PF02779	PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4
SMART:SM00861	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI000015C9F3

Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]

Coordinates

chr3:+:20541269..20546053

Molecular Weight (calculated)

115170.0 Da

IEP (calculated)

6.921

GRAVY (calculated)

-0.443

Length

1017 amino acids

Sequence
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.