Factsheet for GSMUA_Achr8P02070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28580_001	Banana	mitochondrion	77.45	84.88
VIT_13s0019g00510.t01	Wine grape	mitochondrion	80.84	83.87
GSMUA_Achr10P...	Banana	mitochondrion	83.01	81.0
HORVU2Hr1G013170.1	Barley	mitochondrion	79.3	78.09
CDY62385	Canola	mitochondrion	72.19	77.98
Solyc04g011350.2.1	Tomato	plastid	81.87	77.94
CDY53693	Canola	mitochondrion	72.09	77.86
PGSC0003DMT400071319	Potato	mitochondrion	81.67	77.75
CDY29088	Canola	cytosol, mitochondrion	71.68	77.42
CDY13078	Canola	cytosol, mitochondrion	71.58	77.31
AT3G55410.2	Thale cress	mitochondrion	80.64	76.99
PGSC0003DMT400060466	Potato	mitochondrion	80.74	76.94
KRG90561	Soybean	mitochondrion	80.84	76.89
Bra003211.1-P	Field mustard	mitochondrion	80.43	76.87
CDY45626	Canola	mitochondrion	71.37	76.66
CDY08754	Canola	mitochondrion	71.27	76.55
Solyc05g054640.2.1	Tomato	nucleus, unclear	75.18	76.52
Os07t0695800-01	Rice	mitochondrion	79.3	76.39
AT5G65750.1	Thale cress	mitochondrion	80.43	76.2
Bra024417.1-P	Field mustard	mitochondrion	79.51	76.13
KRH01603	Soybean	nucleus	80.33	76.1
Bra027582.1-P	Field mustard	mitochondrion	79.81	76.06
KRH70503	Soybean	nucleus	80.02	75.51
Zm00001d036328_P001	Maize	mitochondrion	78.89	75.39
TraesCS2D01G076900.1	Wheat	unclear	78.89	75.25
TraesCS2A01G079500.1	Wheat	golgi	78.78	75.22
TraesCS2B01G094300.1	Wheat	mitochondrion	78.68	74.98
KRH36194	Soybean	cytosol, mitochondrion	12.77	69.66

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004591	GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016624	GO:GO:0030976	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G02070_001
EnsemblPlants:GSMUA_Achr8P02070_001	EnsemblPlants:GSMUA_Achr8T02070_001	InterPro:KGD_C	UniProt:M0TLV9	PFAM:PF00676	PFAM:PF02779
PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SMART:SM00861
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI000296E210	SEG:seg

Description

Putative 2-oxoglutarate dehydrogenase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G02070_001]

Coordinates

chr8:+:1539815..1546020

Molecular Weight (calculated)

110823.0 Da

IEP (calculated)

7.326

GRAVY (calculated)

-0.460

Length

971 amino acids

Sequence
(BLAST)

001: MAWLRAVSGV ATSAIRRNLA QAPHHTARLR ALPHPPARTF HSTALRRKAE SAAPIPRPVP LSRLSDSFLD GTSSVYLEEL QRAWEADPNS VDESWDNFFR
101: NFVGQAATSP GISGQTIQES MRLLLLVRAY QVNGHMKAKL DPLDLDREFF LGVWRMAGFL SENRPVQTLR EILNRLEQAY CGNVGYEYMH IPDRDKCNWI
201: RDKIETVKPR EYSRDRREVI LDRLIWSTEF ENFLATKWTA AKRFGLEGGE TLIPGMKEMF DRAADLGVES IVIGMPHRGR PTRGGKRIHL SLVANPSHLE
301: AVDPVVIGKT RAKQYHSNDT KRMKNMGVLI HGDGSFAGQG VVYETLHLSA LPNYTTGGTI HIVINNQVAF TTDPRSGRSS QYCTDVAKAL NAPIFHVNGD
401: DMEAVVHVCE LAAEWRLTFH SDVVVDVVCY RRFGHNEIDE PSFTQPKMYQ VIRNHPSALE IYQNKLLESG EISKEEIDRI RSKVTSILNE EFINSKDYVP
501: KRRDWLSAFW TGFKSPEQIS RIRNTGVRPE ILKRVGQAIT SLPENFKPHR AVKKIFEQRG QMIETGEGID WAMGEALAFA TLIIEGNHVR LSGQDVERGT
601: FSHRHSVIHD QQTGEKYCPL DHVLMNQDEE MFTVSNSSLS EFAVLGFESG YSMENPNSLV LWEAQFGDFS NGAQVMFDQF LSSGESKWLR QTGLVLLLPH
701: GYDGQGPEHS SARLERFLQM SDDNPYVIPE MEPTLRKQIQ ECNWQIVNVT TPANYFHVLR RQIHREFRKP LIVMSPKNLL RHKDCKSNLS EFDDLEGHPG
801: FDMQGTRFKR LVKDQNNHKE VEEGINRLIL CSGKASYMIS HLSSLEHLSL LVYYELHEER KKLDRKDVAI CRVEQLCPFP YDLIQRELKR YPNAEIVWCQ
901: EEPMNMGAYG YITPRLYTTM RMLGRGTFED IKYVGRAPSA ATATGFYSVH VQEQTELVQK AMQPGPISHP H

Best Arabidopsis Sequence Match ( AT3G55410.1 )
(BLAST)

0001: MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF
0101: VGQAATSPGI SGQTIQESMR LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS ENRPVQTLRS ILTRLEQAYC
0201: GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
0301: NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG
0401: SFAGQGVVYE TLHLSALPNY TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE WRQTFHSDVV VDLVCYRRFG
0501: HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
0601: VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV
0701: SNSSLSEFGV LGFELGYSME SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL ERYLQMSDDN PYVIPDMEPT
0801: MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
0901: VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV
1001: KEQAGLVQKA IGKEPIN

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:F4IWV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.