Factsheet for GSMUA_Achr10P26720_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28580_001	Banana	mitochondrion	74.67	83.86
Os04t0390000-02	Rice	mitochondrion	85.13	83.37
GSMUA_Achr8P02070_001	Banana	mitochondrion	81.0	83.01
TraesCS2B01G301400.2	Wheat	unclear	84.52	82.78
EES10634	Sorghum	mitochondrion	85.23	82.73
EES10635	Sorghum	mitochondrion	85.23	82.73
TraesCS2A01G284400.1	Wheat	nucleus	84.42	82.68
TraesCS2D01G283300.2	Wheat	golgi	84.32	82.58
Zm00001d025240_P002	Maize	mitochondrion	84.92	82.44
CDY53693	Canola	mitochondrion	73.47	81.31
CDY62385	Canola	mitochondrion	73.37	81.2
Zm00001d003947_P005	Maize	mitochondrion	85.03	80.88
VIT_13s0019g00510.t01	Wine grape	mitochondrion	76.08	80.88
CDY13078	Canola	cytosol, mitochondrion	72.86	80.65
CDY29088	Canola	cytosol, mitochondrion	72.76	80.53
CDY45626	Canola	mitochondrion	72.96	80.31
Solyc04g011350.2.1	Tomato	plastid	82.31	80.29
PGSC0003DMT400071319	Potato	mitochondrion	82.11	80.1
CDY08754	Canola	mitochondrion	72.76	80.09
Bra003211.1-P	Field mustard	mitochondrion	81.51	79.82
AT3G55410.2	Thale cress	mitochondrion	81.51	79.74
Bra024417.1-P	Field mustard	mitochondrion	80.9	79.39
PGSC0003DMT400060466	Potato	mitochondrion	81.21	79.29
AT5G65750.1	Thale cress	mitochondrion	81.51	79.12
KRG90561	Soybean	mitochondrion	81.0	78.94
Solyc05g054640.2.1	Tomato	nucleus, unclear	75.58	78.83
Bra027582.1-P	Field mustard	mitochondrion	80.5	78.61
KRH01603	Soybean	nucleus	80.9	78.54
KRH70503	Soybean	nucleus	81.0	78.33
HORVU2Hr1G070090.1	Barley	mitochondrion	81.21	77.84
KRH36194	Soybean	cytosol, mitochondrion	11.56	64.61
Zm00001d023552_P001	Maize	plastid	9.65	49.74

Protein Annotations

KEGG:00020+1.2.4.2	KEGG:00310+1.2.4.2	KEGG:00380+1.2.4.2	Gene3D:1.10.287.1150	InterPro:2-oxogl_dehyd_N	MapMan:2.3.4.1
InterPro:2oxoglutarate_DH_E1	Gene3D:3.40.50.11610	Gene3D:3.40.50.12470	Gene3D:3.40.50.970	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004591	GO:GO:0005488	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016624	GO:GO:0030976	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G26720_001
EnsemblPlants:GSMUA_Achr10P26720_001	EnsemblPlants:GSMUA_Achr10T26720_001	InterPro:KGD_C	UniProt:M0RLP6	PFAM:PF00676	PFAM:PF02779
PFAM:PF16078	PFAM:PF16870	PIRSF:PIRSF000157	PANTHER:PTHR23152	PANTHER:PTHR23152:SF4	SMART:SM00861
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR00239	InterPro:Transketolase-like_Pyr-bd	UniParc:UPI0002954B7F	SEG:seg

Description

2-oxoglutarate dehydrogenase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G26720_001]

Coordinates

chr10:+:30142329..30149253

Molecular Weight (calculated)

113392.0 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.446

Length

995 amino acids

Sequence
(BLAST)

001: MAWFRAASGV ARLALRRNLA RTPYHVARAG ALPRFQPARC FHSTQLRRAA PVPRPVPLSR LTDSFLDGTS SVYLEELQRA WEADPSSVDE SWDNFFRNFV
101: GQAATSPGIS GQTIQESMRL LLLVRAYQVN GHMKAKLDPL DLEEREMMSG FLSENRPVQT LRSILERLEQ AYCGTVGYEY MHIPNRDQCN WLRERIETVK
201: PREYSQERRQ VILDRLTWST LFENFLATKW KAAKRFGLEG GETLIPGMKE MFDRAADLGV ESIVIGMPHR GRLNVLGNVV RKPLRQIFSE FSGGTKPVEE
301: GEGLYTGTGD VKYHLGTSYD RPTRGGKMIH LSLVANPSHL EAVDPVVVGK ARAKQYYSND IERTRNMGVL IHGDGSFAGQ GVVYETLHLS ALPNYTTGGT
401: IHIVVNNQVA FTTDPKCGRS SQYCTDVAKA LSVPIFHVNG DDVEAVVHVC ELAAEWRQTF HSDVVVDVVC YRRFGHNEID EPSFTQPKMY RVIQDHPSAL
501: ELYEKELLES GRISKDDVDR MRNKVSTILE EEFINSKDYV PRKRDWLSAY WAGFKSPEQI SRIRNTGVKP EILKRVGQAI TTLPENFKPH RAIKRIFQQR
601: AEMIETEEGI DWALAEALAF ATLIVEGNHV RLSGQDVERG TFSHRHAVVH DQETGEMYCP LDHIIINQDE EMFTVSNSSL SEFGVLGFEL GYSMENPNSL
701: VLWEAQFGDF ANGAQVMFDQ FLSSGEAKWL RQTGLAVLLP HGYDGQGPEH SSGRVERFLQ MSDDNPYIIP EMDPTLRKQI QECNWQVVNV TTPANYFHVL
801: RRQLHRDFRK PLIVMSPKNL LRHKDCKSHL SEFDDVLGHP GFDKQGTRFK RLIKDRNDHK EIEEGIDRLI LCSGKVYYEL DEARKNTKRN DVAICRVEQL
901: CPFPYDLIQR ELKRYPNAEI VWCQEEPMNM GAYSYVNPRI YTAMRAISRG NIEDIKYVGR APSAATATGF LSVHVQEQKE ILHKAMQPEP IGFPF

Best Arabidopsis Sequence Match ( AT5G65750.1 )
(BLAST)

0001: MVWFRIGSSV AKLAIRRTLS QSRCGSYATR TRVLPCQTRC FHSTILKSKA ESAAPVPRPV PLSKLTDSFL DGTSSVYLEE LQRAWEADPN SVDESWDNFF
0101: RNFVGQASTS PGISGQTIQE SMRLLLLVRA YQVNGHMKAK LDPLGLEKRE IPEDLTPGLY GFTEADLDRE FFLGVWRMSG FLSENRPVQT LRSILSRLEQ
0201: AYCGTIGYEY MHIADRDKCN WLRDKIETPT PRQYNSERRM VIYDRLTWST QFENFLATKW TTAKRFGLEG AESLIPGMKE MFDRSADLGV ENIVIGMPHR
0301: GRLNVLGNVV RKPLRQIFSE FSGGTRPVDE VGLYTGTGDV KYHLGTSYDR PTRGGKHLHL SLVANPSHLE AVDPVVIGKT RAKQYYTKDE NRTKNMGILI
0401: HGDGSFAGQG VVYETLHLSA LPNYCTGGTV HIVVNNQVAF TTDPREGRSS QYCTDVAKAL SAPIFHVNAD DIEAVVHACE LAAEWRQTFH SDVVVDLVCY
0501: RRFGHNEIDE PSFTQPKMYK VIRSHPSSLQ IYQEKLLQSG QVTQEDIDKI QKKVSSILNE EYEASKDYIP QKRDWLASHW TGFKSPEQIS RIRNTGVKPE
0601: ILKNVGKAIS TFPENFKPHR GVKRVYEQRA QMIESGEGID WGLGEALAFA TLVVEGNHVR LSGQDVERGT FSHRHSVLHD QETGEEYCPL DHLIKNQDPE
0701: MFTVSNSSLS EFGVLGFELG YSMENPNSLV IWEAQFGDFA NGAQVMFDQF ISSGEAKWLR QTGLVVLLPH GYDGQGPEHS SGRLERFLQM SDDNPYVIPE
0801: MDPTLRKQIQ ECNWQVVNVT TPANYFHVLR RQIHRDFRKP LIVMAPKNLL RHKQCVSNLS EFDDVKGHPG FDKQGTRFKR LIKDQSGHSD LEEGIRRLVL
0901: CSGKVYYELD EERKKSETKD VAICRVEQLC PFPYDLIQRE LKRYPNAEIV WCQEEPMNMG GYQYIALRLC TAMKALQRGN FNDIKYVGRL PSAATATGFY
1001: QLHVKEQTDL VKKALQPDPI TPVIP

Arabidopsis Description

2-oxoglutarate dehydrogenase, E1 component [Source:UniProtKB/TrEMBL;Acc:Q9FLH2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.