Factsheet for HORVU0Hr1G015130.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G013160.1	Barley	cytosol	56.11	56.29
HORVU6Hr1G013130.1	Barley	cytosol	55.45	55.63
HORVU6Hr1G009190.1	Barley	cytosol	54.79	53.21
CDY18546	Canola	cytosol	25.08	51.7
Bra037559.1-P	Field mustard	cytosol	25.74	51.32
Os02t0602500-02	Rice	nucleus	48.84	47.59
EES07109	Sorghum	nucleus	47.52	46.6
Zm00001d017131_P001	Maize	nucleus	47.19	45.98
HORVU6Hr1G054640.2	Barley	mitochondrion	51.82	44.1
TraesCS3B01G609900.1	Wheat	nucleus	39.27	41.75
TraesCS3A01G532300.1	Wheat	nucleus	30.36	41.63
AT3G18790.1	Thale cress	nucleus	37.95	38.33
KRH15273	Soybean	nucleus	37.62	38.13
KRH38151	Soybean	endoplasmic reticulum	37.62	38.13
KRH55159	Soybean	nucleus	37.29	37.54
Bra022357.1-P	Field mustard	nucleus	36.63	37.37
VIT_04s0044g00540.t01	Wine grape	nucleus	36.63	37.25
PGSC0003DMT400017978	Potato	nucleus	34.65	35.12
Solyc05g051070.2.1	Tomato	nucleus	34.65	33.87
CDX92274	Canola	nucleus	29.7	33.71
CDX99314	Canola	nucleus	29.37	33.33
CDX95495	Canola	nucleus	8.91	32.93
GSMUA_Achr9P16220_001	Banana	cytosol	33.0	18.62

Protein Annotations

EnsemblPlants:HORVU0Hr1G015130.1	EnsemblPlantsGene:HORVU0Hr1G015130	Gene3D:1.10.287.660	GO:GO:0000350	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	InterPro:Helix_hairpin_bin_sf	InterPro:IPR029012	InterPro:Isy1
InterPro:Isy1_sf	ncoils:Coil	PANTHER:PTHR13021	PFAM:PF06246	SEG:seg	SUPFAM:SSF140102
UniParc:UPI000B47E153	UniProt:A0A287E219	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:83310028..83311091

Molecular Weight (calculated)

19746.3 Da

IEP (calculated)

4.905

GRAVY (calculated)

-0.464

Length

303 amino acids

Sequence
(BLAST)

001: MARNEEKAQA LLNRFITIKQ EEKRKPRERR PYLASQCRDL AHADRWRVDI LREIGVKVAE IQNEGLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXYYG YHDDEDGVLE PLEAAAEKRK RDEVVTEWHR
201: VERVRREAMK NVVSGEVAGA GGRGGEAAAR EVLFEEVELE VEEERRLEEA GREFVAHVPL PDEKEIERMV LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXX

Best Arabidopsis Sequence Match ( AT3G18790.1 )
(BLAST)

001: MARNEEKAQS MLNRFITQKE SEKKKPKERR PYLASECRDL AEADKWRQQI LREIGSKVAE IQNEGLGEHR LRDLNDEINK LLRERYHWER RIVELGGHNY
101: SKHSAKMTDL EGNIIDVPNP SGRGPGYRYF GAAKKLPGVR ELFEKPPELR KRKTRYDIYK RIDASYYGYR DDEDGILEKL ERKSEGGMRK RSVEEWRRLD
201: EVRKEARKGA SEVVSVGAAA AAAREVLFEE EEDVVEEERM EREKEEEKER EFVVHVPLPD EKEIEKMVLE KKKMDLLSKY ASEDLVEQQT EAKSMLNIHR

Arabidopsis Description

AT3G18790 protein [Source:UniProtKB/TrEMBL;Acc:Q9LS97]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.