Factsheet for HORVU3Hr1G074720.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G338000.1	Wheat	nucleus	92.59	80.0
TraesCS3D01G303400.1	Wheat	nucleus	88.27	76.47
TraesCS3A01G298500.1	Wheat	nucleus	87.96	76.41
OQU87614	Sorghum	cytosol	76.23	70.77
Os01t0768300-00	Rice	cytosol	75.62	70.61
Zm00001d043333_P001	Maize	mitochondrion	68.83	62.82
AT1G56080.1	Thale cress	nucleus	47.53	49.68
GSMUA_Achr9P26210_001	Banana	cytosol	52.16	49.27
KRH13038	Soybean	nucleus	51.54	49.26
KRH44865	Soybean	nucleus	51.23	48.97
Solyc10g005580.2.1	Tomato	nucleus	51.54	48.69
PGSC0003DMT400029232	Potato	nucleus	50.93	48.1
VIT_19s0027g01640.t01	Wine grape	nucleus	50.62	47.95
CDY54262	Canola	nucleus	44.75	47.54
CDY66795	Canola	cytosol	35.49	47.52
CDY63493	Canola	nucleus	44.75	47.39
Bra040781.1-P	Field mustard	nucleus	44.75	47.39
AT1G16520.1	Thale cress	cytosol	47.22	47.08
PGSC0003DMT400056890	Potato	nucleus	49.69	47.08
CDY40055	Canola	cytosol	46.91	45.92
Bra026043.1-P	Field mustard	cytosol	46.6	45.62
Solyc07g066520.2.1	Tomato	nucleus	49.07	44.04
HORVU2Hr1G098580.1	Barley	cytosol	28.09	24.53

Protein Annotations

EnsemblPlants:HORVU3Hr1G074720.1	EnsemblPlantsGene:HORVU3Hr1G074720	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:WAT1-related
ncoils:Coil	PANTHER:PTHR31218	PANTHER:PTHR31218:SF76	SEG:seg	UniParc:UPI000B469BBE	UniProt:A0A287LPC4
MapMan:13.7.2.4	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:559499433..559501360

Molecular Weight (calculated)

35363.7 Da

IEP (calculated)

10.579

GRAVY (calculated)

-0.578

Length

324 amino acids

Sequence
(BLAST)

001: RSMTQTPGAH AGAAPPAPPT PAEGAGLSEA IAAALPPDPY DQLEVARKIT AAAVAARASR LEHEAARLRQ KLADKDRLAA ELADRADALD QALRDADARL
101: RTVLQDNAKL VKERDSLVQT SRKLARDLAK LETFKRHLMQ SLGDDNSSSQ ETVDIRTCEQ SVAKASSWRV ARPFEQKLTI THMTPRLIAD PAPKQRSSSA
201: ASARRYSTAV SPKLTSRATS PRLEGHMAMS AWLPSSKMSS AANSPPRGHS VSGRTTRIDG KEFFRQARSR LSYEQFAAFL ANIKELNAHR QSQEETLDKA
301: DQIFGAENKD LFVSFQGLLS RSLT

Best Arabidopsis Sequence Match ( AT1G56080.1 )
(BLAST)

001: MSQSGGDFNL SDEILAVIPT DPYDQLDLAR KITSMAIASR VSNLESQVSG LRQKLLEKDR LVHELEDRVS SFERLYHEAD SSLKNVVDEN MKLTQERDSL
101: AITAKKLGRD YAKLEAFKRQ LMQSLNDDNP SQTETADVRM VPRGKDENSN GSYSNNEGLS EARQRQSMTP QFSPAFTPSG TPKILSTAAS PRSYSAASSP
201: KLFSGAASPT SSHYDIRMWS STSQQSSVAN SPPRSHSVSA RHPRIDGKEF FRQARSRLSY EQFSAFLANI KELNARKQGR EETLQKAEEI FGKENNDLYI
301: SFKGLLTSGR

Arabidopsis Description

At1g56080 [Source:UniProtKB/TrEMBL;Acc:Q0IGM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.