Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026043.1-P | Field mustard | cytosol | 98.76 | 72.21 |
| CDY40055 | Canola | cytosol | 97.93 | 71.6 |
| Os03t0659800-01 | Rice | plastid | 38.02 | 70.23 |
| AT1G16520.1 | Thale cress | cytosol | 85.95 | 64.0 |
| KRH13038 | Soybean | nucleus | 67.77 | 48.38 |
| KRH44865 | Soybean | nucleus | 67.36 | 48.08 |
| VIT_19s0027g01640.t01 | Wine grape | nucleus | 64.88 | 45.91 |
| Solyc10g005580.2.1 | Tomato | nucleus | 64.88 | 45.77 |
| PGSC0003DMT400029232 | Potato | nucleus | 64.46 | 45.48 |
| PGSC0003DMT400056890 | Potato | nucleus | 63.64 | 45.03 |
| Solyc07g066520.2.1 | Tomato | nucleus | 64.46 | 43.21 |
| TraesCS4A01G297400.1 | Wheat | cytosol | 58.68 | 42.39 |
| TraesCS4B01G016300.1 | Wheat | cytosol | 59.5 | 42.11 |
| Zm00001d033465_P001 | Maize | cytosol | 59.09 | 41.81 |
| CDY54262 | Canola | nucleus | 52.48 | 41.64 |
| EER91123 | Sorghum | cytosol | 59.5 | 41.62 |
| Zm00001d013624_P001 | Maize | cytosol | 58.68 | 41.4 |
| TraesCS4D01G014700.1 | Wheat | cytosol | 58.26 | 41.35 |
| GSMUA_Achr9P26210_001 | Banana | cytosol | 58.26 | 41.11 |
| CDY63493 | Canola | nucleus | 50.0 | 39.54 |
| Os04t0616000-01 | Rice | nucleus | 47.93 | 37.18 |
| Zm00001d026302_P002 | Maize | nucleus | 50.41 | 36.86 |
| TraesCS2A01G419200.1 | Wheat | cytosol | 50.41 | 36.86 |
| TraesCS2D01G416200.1 | Wheat | cytosol | 50.41 | 36.86 |
| EES12856 | Sorghum | nucleus | 50.83 | 36.5 |
| TraesCS2B01G437900.2 | Wheat | cytosol | 50.0 | 36.23 |
| Os01t0768300-00 | Rice | cytosol | 51.65 | 36.02 |
| Zm00001d002315_P003 | Maize | cytosol | 49.17 | 35.84 |
| HORVU3Hr1G074720.1 | Barley | cytosol | 47.52 | 35.49 |
| OQU87614 | Sorghum | cytosol | 50.83 | 35.24 |
| GSMUA_Achr6P20060_001 | Banana | nucleus | 48.76 | 35.01 |
| TraesCS3A01G298500.1 | Wheat | nucleus | 49.17 | 31.9 |
| TraesCS3D01G303400.1 | Wheat | nucleus | 49.17 | 31.82 |
| TraesCS3B01G338000.1 | Wheat | nucleus | 48.76 | 31.47 |
| HORVU2Hr1G098580.1 | Barley | cytosol | 45.45 | 29.65 |
| CDY65145 | Canola | nucleus | 37.19 | 26.95 |
| CDY22903 | Canola | nucleus | 36.78 | 26.57 |
| Zm00001d043333_P001 | Maize | mitochondrion | 37.6 | 25.63 |
| Zm00001d033261_P001 | Maize | cytosol | 7.44 | 22.78 |
| Zm00001d029987_P001 | Maize | cytosol | 7.44 | 18.56 |
| Zm00001d038230_P001 | Maize | cytosol | 7.02 | 7.08 |
| Zm00001d019442_P001 | Maize | cytosol | 4.55 | 6.83 |
| Zm00001d003628_P001 | Maize | plastid | 3.31 | 4.26 |
| Zm00001d043760_P001 | Maize | cytosol | 0.83 | 1.85 |
Protein Annotations
| EnsemblPlants:CDY66795 | EnsemblPlantsGene:GSBRNA2T00055767001 | GO:A0A078JK53 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:WAT1-related | ncoils:Coil | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF134 | ProteinID:CDY66795 | ProteinID:CDY66795.1 |
| SEG:seg | UniParc:UPI0004EEBD5C | UniProt:A0A078JK53 | MapMan:13.7.2.4 | : | : |
Description
BnaA06g38350DBnaA06g38350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK53]
Coordinates
chrLK035472:-:13229..14790
Molecular Weight (calculated)
26790.5 Da
IEP (calculated)
10.356
GRAVY (calculated)
-0.779
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MILTKEKDSL AMTVTKLTRD LAKLETFKRQ LIKSLSDESA PPQTEPVDIK ACDQSSIGST GSYTGKADER TSVHSTHRSY SGSSDMNNPA VEASKYAGNK
101: FSMTPYISPR LTPSATPKII STSVSPRGYS AAGSPKRTSG AVSPTKTTIW YPSSQQSSAA NSPPRNRTLP ARTPRMDGKE FFRQARSRLS YEQFSAFLAN
201: IKELNAQKQT REETLRKADE IFGEENKDLY LSFQGLLNRN MR
101: FSMTPYISPR LTPSATPKII STSVSPRGYS AAGSPKRTSG AVSPTKTTIW YPSSQQSSAA NSPPRNRTLP ARTPRMDGKE FFRQARSRLS YEQFSAFLAN
201: IKELNAQKQT REETLRKADE IFGEENKDLY LSFQGLLNRN MR
001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR
Arabidopsis Description
At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.