Factsheet for Zm00001d013624_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0659800-01	Rice	plastid	33.82	88.55
EER91123	Sorghum	cytosol	88.63	87.86
Zm00001d033465_P001	Maize	cytosol	87.46	87.72
Zm00001d043760_P001	Maize	cytosol	24.78	78.7
TraesCS4D01G014700.1	Wheat	cytosol	75.51	75.95
TraesCS4B01G016300.1	Wheat	cytosol	75.51	75.73
TraesCS4A01G297400.1	Wheat	cytosol	72.59	74.33
Zm00001d019442_P001	Maize	cytosol	27.7	59.01
CDY66795	Canola	cytosol	41.4	58.68
GSMUA_Achr9P26210_001	Banana	cytosol	57.73	57.73
AT1G16520.1	Thale cress	cytosol	52.77	55.69
PGSC0003DMT400029232	Potato	nucleus	55.69	55.69
Solyc10g005580.2.1	Tomato	nucleus	55.39	55.39
VIT_19s0027g01640.t01	Wine grape	nucleus	54.81	54.97
KRH44865	Soybean	nucleus	53.94	54.57
Bra026043.1-P	Field mustard	cytosol	52.48	54.38
KRH13038	Soybean	nucleus	53.35	53.98
CDY40055	Canola	cytosol	51.9	53.78
Zm00001d029987_P001	Maize	cytosol	15.16	53.61
AT1G56080.1	Thale cress	nucleus	47.81	52.9
PGSC0003DMT400056890	Potato	nucleus	52.48	52.63
CDY54262	Canola	nucleus	46.36	52.13
Zm00001d033261_P001	Maize	cytosol	11.95	51.9
Bra040781.1-P	Field mustard	nucleus	45.19	50.65
CDY63493	Canola	nucleus	45.19	50.65
Solyc07g066520.2.1	Tomato	nucleus	52.19	49.58
Zm00001d026302_P002	Maize	nucleus	47.52	49.24
Zm00001d002315_P003	Maize	cytosol	46.65	48.19
Zm00001d043333_P001	Maize	mitochondrion	47.52	45.92
Zm00001d038230_P001	Maize	cytosol	29.74	42.5
Zm00001d010314_P001	Maize	nucleus	40.23	40.95
Zm00001d003628_P001	Maize	plastid	22.16	40.43
Zm00001d038155_P001	Maize	nucleus	39.36	39.59

Protein Annotations

EnsemblPlants:Zm00001d013624_P001	EnsemblPlants:Zm00001d013624_T001	EnsemblPlantsGene:Zm00001d013624	EntrezGene:100276765	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:WAT1-related	ncoils:Coil	PANTHER:PTHR31218	PANTHER:PTHR31218:SF76	ProteinID:AQK64043.1
SEG:seg	UniParc:UPI0008458BC8	UniProt:A0A1D6GL51	MapMan:13.7.2.4	:	:

Description

No Description!

Coordinates

chr5:+:15728769..15732353

Molecular Weight (calculated)

37542.2 Da

IEP (calculated)

9.879

GRAVY (calculated)

-0.689

Length

343 amino acids

Sequence
(BLAST)

001: MPLGDGAEAA DFVLPDELLA ALPRDPYEQL DLARRITALA VSGRVSGLER EAGRLRAEAA GKDRENAELR ERVVLLDTAL QETNARLRAA LEDNIKLSKE
101: RDSLAQTSKK LARDLQKLES FKRHLMQSLR DDSSSQPQET VDITTCDQPV ATKASFSGDG GSGSHPTTNI FSESLDAGST NRDGTASRPP IQKYALSSHI
201: TPWLTPKATP KIMSTSASPR QISTTATPKL MSGATSPTKS RIEAHMSMTP WYPSSKQSSA ASSPPRGGSN PGRTPRVDGK EFFRQARSRL SYEQFGAFLA
301: NIKELNAHKQ SREETLKKAE EIFGPENKDL YLSFRGLLNR SMP

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.