Factsheet for Zm00001d038230_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043760_P001	Maize	cytosol	32.5	72.22
Zm00001d019442_P001	Maize	cytosol	35.42	52.8
Zm00001d003628_P001	Maize	plastid	27.5	35.11
Zm00001d013624_P001	Maize	cytosol	42.5	29.74
Zm00001d029987_P001	Maize	cytosol	11.67	28.87
EER91123	Sorghum	cytosol	38.75	26.88
Zm00001d033465_P001	Maize	cytosol	36.67	25.73
TraesCS4D01G014700.1	Wheat	cytosol	31.25	21.99
TraesCS4B01G016300.1	Wheat	cytosol	31.25	21.93
Zm00001d033261_P001	Maize	cytosol	7.08	21.52
TraesCS4A01G297400.1	Wheat	cytosol	29.17	20.9
GSMUA_Achr9P26210_001	Banana	cytosol	25.83	18.08
KRH44865	Soybean	nucleus	22.92	16.22
AT1G16520.1	Thale cress	cytosol	21.67	16.0
VIT_19s0027g01640.t01	Wine grape	nucleus	22.5	15.79
Zm00001d026302_P002	Maize	nucleus	21.67	15.71
Zm00001d002315_P003	Maize	cytosol	21.67	15.66
KRH13038	Soybean	nucleus	22.08	15.63
AT1G56080.1	Thale cress	nucleus	20.0	15.48
Zm00001d010314_P001	Maize	nucleus	21.67	15.43
Zm00001d043333_P001	Maize	mitochondrion	22.08	14.93
PGSC0003DMT400029232	Potato	nucleus	21.25	14.87
CDY54262	Canola	nucleus	18.75	14.75
Zm00001d038155_P001	Maize	nucleus	20.83	14.66
Solyc10g005580.2.1	Tomato	nucleus	20.83	14.58
Bra026043.1-P	Field mustard	cytosol	20.0	14.5
CDY63493	Canola	nucleus	18.33	14.38
Bra040781.1-P	Field mustard	nucleus	18.33	14.38
PGSC0003DMT400056890	Potato	nucleus	20.42	14.33
CDY40055	Canola	cytosol	19.58	14.2
Solyc07g066520.2.1	Tomato	nucleus	20.42	13.57
Os03t0659800-01	Rice	plastid	5.42	9.92
CDY66795	Canola	cytosol	7.08	7.02

Protein Annotations

EnsemblPlants:Zm00001d038230_P001	EnsemblPlants:Zm00001d038230_T001	EnsemblPlantsGene:Zm00001d038230	Gene3D:2.30.29.30	InterPro:GEM-like	InterPro:GRAM
InterPro:IPR011993	InterPro:PH-like_dom_sf	ncoils:Coil	PANTHER:PTHR31969	PANTHER:PTHR31969:SF14	PFAM:PF02893
ProteinID:AQK86090.1	SMART:SM00568	UniParc:UPI000844C6D3	UniProt:A0A1D6M4N4	MapMan:13.7.2.4	:

Description

No Description!

Coordinates

chr6:+:152063110..152064250

Molecular Weight (calculated)

26771.5 Da

IEP (calculated)

9.558

GRAVY (calculated)

-0.185

Length

240 amino acids

Sequence
(BLAST)

001: MPLGDGAEAA DFVLPNELLA ALPRDPYEQL DLARRITTLV VSGQVSGLEQ EAGRMRAEAA GKDRENAELR ERVVLLDTAL QETNARLRSP MLTMPDLLQA
101: METFTQEHVI GIPLTSNHGT KNFRNYKRKL SFGAKVLQAG GIDKVFREYF AVEKDEKLRK AFQCYLSTTA GPIAGMLFIS TKKIAFHSDR PLSFTSPKGG
201: STRVPYKVLI PTERMKSASV RILYFLSVSF FVGTELCCRY

Best Arabidopsis Sequence Match ( AT5G23370.1 )
(BLAST)

001: MTLSRVHQQL ITFPAVKTSP AGYLPDPASI NKLQIPTSSK FSFLTGKGKS MLRKKKNDSF TNGVRDQDKL GPKLTETVKR KLSLGARILQ MGGLEKIYKR
101: LFKVSDEEKL FKAYQCYLST TAGPIAGLLF ISSKKIAFCS ERSIKVASPQ GELNRVHYKV SIPLCKINGV NQSQNTTKPS QKYLEVVTVD GFDFWFMGFL
201: SYQKAFNCLE QALSLSFKQ

Arabidopsis Description

Putative GEM-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMW4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.