CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0659800-01	Rice	plastid	35.26	93.13
Zm00001d013624_P001	Maize	cytosol	87.86	88.63
Zm00001d033465_P001	Maize	cytosol	87.28	88.3
TraesCS4B01G016300.1	Wheat	cytosol	80.35	81.29
TraesCS4D01G014700.1	Wheat	cytosol	79.19	80.35
TraesCS4A01G297400.1	Wheat	cytosol	76.01	78.51
Zm00001d043760_P001	Maize	cytosol	21.97	70.37
CDY66795	Canola	cytosol	41.62	59.5
OQU87614	Sorghum	cytosol	59.25	58.74
GSMUA_Achr9P26210_001	Banana	cytosol	57.51	58.02
VIT_19s0027g01640.t01	Wine grape	nucleus	56.36	57.02
KRH44865	Soybean	nucleus	55.49	56.64
AT1G16520.1	Thale cress	cytosol	53.18	56.62
Solyc10g005580.2.1	Tomato	nucleus	56.07	56.56
PGSC0003DMT400029232	Potato	nucleus	56.07	56.56
KRH13038	Soybean	nucleus	54.91	56.05
Bra026043.1-P	Field mustard	cytosol	52.89	55.29
PGSC0003DMT400056890	Potato	nucleus	54.62	55.26
AT1G56080.1	Thale cress	nucleus	49.13	54.84
CDY40055	Canola	cytosol	52.31	54.68
Zm00001d019442_P001	Maize	cytosol	25.14	54.04
CDY54262	Canola	nucleus	47.11	53.44
Solyc07g066520.2.1	Tomato	nucleus	54.34	52.08
EES12856	Sorghum	nucleus	50.58	51.93
CDY63493	Canola	nucleus	45.66	51.63
Bra040781.1-P	Field mustard	nucleus	45.66	51.63
Zm00001d003628_P001	Maize	plastid	21.39	39.36
Zm00001d038230_P001	Maize	cytosol	26.88	38.75
KXG21969	Sorghum	cytosol	39.6	34.95

Protein Annotations

MapMan:13.7.2.4	EntrezGene:8056761	UniProt:C5WQF2	ncoils:Coil	EnsemblPlants:EER91123	ProteinID:EER91123
ProteinID:EER91123.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
PANTHER:PTHR31218	PANTHER:PTHR31218:SF76	EnsemblPlantsGene:SORBI_3001G146900	UniParc:UPI0001A82025	InterPro:WAT1-related	RefSeq:XP_002464125.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:11810798..11814254

Molecular Weight (calculated)

37709.5 Da

IEP (calculated)

10.019

GRAVY (calculated)

-0.673

Length

346 amino acids

Sequence
(BLAST)

001: MPLGDGAAAG AMAGDFALPD ELLAALPRDP YEQLDLARRI TALAVAGRVS GLEREAGRLR AEAAGKDREN AELRERVALL DTALQETNAR LRAALEDNIK
101: LSKERDSLAQ TSKKLARDLQ KLESFKRHLM QSLRDDSSSP QETVDITTCD QPVASKASSS GDGGSVSHPT TNIFSESLDA GSTNRDGTIA RPPIQKYTLS
201: SHITPRLTPE ATPKIMSTSA SPRRMSTAAT PKLMSGATSP TKSRIEAHMS MTPWYPSSKQ SSAANSPPRG RSNPGRTPRI DGKEFFRQAR SRLSYEQFGA
301: FLANIKELNA HKQSREETLK KAEEIFGPDN KDLYLSFQGL LNRSMP

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.